Job Description P0C0V0 Confidence 91.44% Date Thu Jan 5 11:30:02 GMT 2012 Rank 354 Aligned Residues 135 % Identity 16% Template c1wqsA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:3c-like protease; PDBTitle: crystal structure of norovirus 3c-like protease Resolution 2.80 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																														.																																						.	.
Query SS confidence																														.																																						.	.
Query Sequence		Q	Q	Q	K	F	M	A	L	G	S	G	V	I	I	D	A	D	K	G	Y	V	V	T	N	N	H	V	V	.	D	N	A	T	V	I	K	V	Q	L	S	D	G	R	K	F	D	A	K	M	V	G	K	D	P	R	S	D	I	A	L	I	Q	I	Q	N	P	.	.	K	N	L	T	A	I	K	M	A	D	S	D
Query Conservation																														.																																						.	.
Alig confidence																			.	.										.										.	.	.	.	.	.	.																						.	.
Template Conservation																			.	.																				.	.	.	.	.	.	.
Template Sequence		S	R	V	V	R	F	G	S	G	W	G	F	W	V	S	P	T	.	.	V	F	I	T	T	T	H	V	I	P	T	G	V	R	E	F	F	G	E	.	.	.	.	.	.	.	P	I	E	S	I	A	I	H	R	A	G	E	F	T	Q	F	R	F	S	R	K	V	R	P	D	L	T	G	M	V	L	E	E	G	C
Template Known Secondary structure		T	T					S	S	S					S	S	S	S	.	.						G	G	G	S		S	S		S	B	S	S	S	S	.	.	.	.	.	.	.	B	G	G	G	S						T	T							S	S		S		T	T								S	S
Template Predicted Secondary structure																			.	.																				.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.						.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																																		.	.	.	.	.	.	.																.	.	.
Query SS confidence													.	.	.	.	.																																		.	.	.	.	.	.	.																.	.	.
Query Sequence		A	L	R	V	G	D	Y	T	V	A	I	.	.	.	.	.	G	N	P	F	G	L	G	E	T	V	T	S	G	I	V	S	A	L	G	R	S	G	L	N	A	E	N	Y	E	N	F	I	Q	.	.	.	.	.	.	.	T	D	A	A	I	N	R	G	N	S	G	G	A	L	V	.	.	.	N	L	N	G	E	L
Query Conservation													.	.	.	.	.																																		.	.	.	.	.	.	.																.	.	.
Alig confidence				.	.								.	.	.	.	.				.	.																													.	.	.	.	.	.	.																.	.	.
Template Conservation				.	.																.	.
Template Sequence		P	E	.	.	G	V	V	C	S	I	L	I	K	R	D	S	G	E	L	.	.	L	P	L	A	V	R	M	G	A	I	A	S	M	K	I	Q	G	R	L	V	H	G	Q	S	G	M	L	L	T	G	A	N	A	K	G	M	D	L	G	T	L	P	G	D	C	G	A	P	Y	V	Y	K	R	N	N	D	W	V	V
Template Known Secondary structure			T	.	.	T										S	S	S			.	.															G	G	G	S										S	S	S	S			S	S	S		S	S			T	T		T	T								S	S	S
Template Predicted Secondary structure				.	.																.	.
Template SS confidence
		78	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		248	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	I	N	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	G	V	H	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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