Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence96.58%DateThu Jan 5 11:30:02 GMT 2012
Rank307Aligned Residues168
% Identity16%Templatec1w0zU_
PDB info PDB header:hydrolaseChain: U: PDB Molecule:urokinase-type plasminogen activator; PDBTitle: urokinase type plasminogen activator
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130...... ...140.........150.........160.........170.........180
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Query Sequence  LGSGVIIDADKGYVVTNNHVVDNA. . . . . . . . . . . . TVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMAD
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Template Sequence  VCGGSLISPC. . WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE
Template Known Secondary structure  TT..
GGGTTT


GGGS

BSSS

TT

TT

SS
S


TT
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   41........50 .........60.........70.........80.........90.........100.........110........
 
   181........190......... 200.........210.........220.........230..
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Query Sequence  SDALRVGDYTVAIGNPFGL. . . GETVTSGIVSALGRSGLNAENYENFIQTDAAIN. . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                                                  
Template Sequence  GRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP
Template Known Secondary structure  S





SS



B


TT



TT
S

SSTT
SS

SB

TSTTTTGGGS
TT
T
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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