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Job Description | P0A7W7 | Confidence | 1.60% | Date | Thu Jan 5 11:06:21 GMT 2012 |
Rank | 88 | Aligned Residues | 31 |
% Identity | 16% | Template | d1p9pa_ |
SCOP info | alpha/beta knot
| alpha/beta knot
| tRNA(m1G37)-methyltransferase TrmD
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Resolution | 2.50 |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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