Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7W7
Confidence10.52%DateThu Jan 5 11:06:21 GMT 2012
Rank16Aligned Residues21
% Identity33%Templated1a6sa_
SCOP infoRetroviral matrix proteins Retroviral matrix proteins GAG polyprotein M-domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40........
Predicted Secondary structure 







Query SS confidence 




















Query Sequence  PSSKLKVAIANVLKEEGFIED
Query Conservation 
 

    

 

  



  
Alig confidence 




















Template Conservation 

 


 
 

 
  

 
 
Template Sequence  PSKKEIGAMLSLLQKEGLLMS
Template Known Secondary structure  S
SSTGGGTT
TT
Template Predicted Secondary structure 







Template SS confidence 




















   21........30.........40.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions