Job Description P0A7W7 Confidence 100.00% Date Thu Jan 5 11:06:21 GMT 2012 Rank 7 Aligned Residues 128 % Identity 45% Template c3bbnH_ PDB info PDB header:ribosome Chain: H: PDB Molecule:ribosomal protein s8; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. Resolution 9.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.
Predicted Secondary structure																																																										.														.	.	.	.
Query SS confidence																																																										.														.	.	.	.
Query Sequence		M	S	M	Q	D	P	I	A	D	M	L	T	R	I	R	N	G	Q	A	A	N	K	A	A	V	T	M	P	S	S	K	L	K	V	A	I	A	N	V	L	K	E	E	G	F	I	E	D	F	K	V	E	G	D	T	K	.	P	E	L	E	L	T	L	K	Y	F	Q	G	K	.	.	.	.	A	V	V	E	S	I
Query Conservation																																																										.														.	.	.	.
Alig confidence				.																																																						.														.	.	.	.
Template Conservation				.
Template Sequence		M	G	.	K	D	T	I	A	D	I	I	T	C	I	R	N	A	D	M	N	R	K	G	T	V	R	I	V	S	T	N	I	T	E	N	I	V	K	I	L	L	R	E	G	F	I	E	N	A	R	K	H	Q	E	R	N	K	Y	F	L	V	L	T	L	R	H	R	R	N	K	K	G	P	Y	L	N	T	F	H	L
Template Known Secondary structure				.	S																T	T		S														T					T	T	T	S	S	S							S	S	S										B				S	S	S			B	S		S
Template Predicted Secondary structure				.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	V	S	R	P	G	L	R	I	Y	K	R	K	D	E	L	P	K	V	M	A	G	L	G	I	A	V	V	S	T	S	K	G	V	M	T	D	R	A	A	R	Q	A	G	L	G	G	E	I	I	C	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	V	S	R	P	G	L	R	I	Y	S	N	Y	Q	R	I	P	R	I	L	G	G	M	G	I	A	I	L	S	T	S	R	G	I	M	T	D	R	E	A	R	L	E	G	I	G	G	E	I	L	C	Y	I
Template Known Secondary structure				S	S	B	T	T	B						S	S	S				G	G	G	T	T	S							S	S	S				T	T						T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions