Job Description P0A7W7 Confidence 100.00% Date Thu Jan 5 11:06:21 GMT 2012 Rank 9 Aligned Residues 125 % Identity 22% Template c2xznH_ PDB info PDB header:ribosome Chain: H: PDB Molecule:ribosomal protein s8 containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.																														.										.
Query SS confidence																												.																														.										.
Query Sequence		S	M	Q	D	P	I	A	D	M	L	T	R	I	R	N	G	Q	A	A	N	K	A	A	V	T	M	.	P	S	S	K	L	K	V	A	I	A	N	V	L	K	E	E	G	F	I	E	D	F	K	V	E	G	D	T	K	.	P	E	L	E	L	T	L	K	Y	.	F	Q	G	K	A	V	V	E	S	I	Q	R	V
Query Conservation																												.																														.										.
Alig confidence																												.																														.										.									.	.
Template Conservation																																																																													.	.
Template Sequence		V	K	V	N	I	L	A	E	C	L	K	D	L	V	N	A	E	K	M	G	K	K	Q	V	L	L	R	P	V	S	K	V	V	L	K	F	L	R	I	M	Q	K	N	G	Y	I	G	E	F	E	V	I	D	D	H	R	S	K	K	V	V	V	E	L	I	G	R	I	N	K	C	G	V	I	S	.	.	P	R	Y
Template Known Secondary structure																					T		S						S															T	T	S	S									S	S	S									S									T	.	.	T
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	G	L	R	I	Y	K	R	K	D	E	L	P	K	V	M	A	G	L	G	I	A	V	V	S	T	S	K	G	V	M	T	D	R	A	A	R	Q	A	G	L	G	G	E	I	I	C	Y	V
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		D	V	P	L	A	D	F	E	K	W	T	N	N	I	L	P	S	R	.	Q	F	G	N	V	V	L	T	T	T	Y	G	I	L	T	H	E	E	C	R	K	R	H	T	G	G	K	I	L	G	F	F
Template Known Secondary structure		B			G	G	G									S	S	S	T	.	T									S	S					T	T						T
Template Predicted Secondary structure																				.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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