 |
Job Description | P21363 | Confidence | 93.75% | Date | Thu Jan 5 11:38:10 GMT 2012 |
Rank | 76 | Aligned Residues | 140 |
% Identity | 11% | Template | c3bt5A_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:uncharacterized protein duf305; |
PDBTitle: crystal structure of duf305 fragment from deinococcus2 radiodurans
|
Resolution | 1.35 Å |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
. | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
H | D | W | L | R | D | A | H | A | M | E | K | Q | A | E | S | M | L | E | S | M | A | S | R | I | D | N | Y | P | E | L | R | A | R | I | E | Q | H | L | S | E | T | K | N | Q | I | V | Q | L | E | T | I | L | D | R | N | D | I | S | R | S | V | I | K | D | S | M | S | . |
. |
. |
. |
K | M | A | A | L | G | Q | S |
Query Conservation |   |
|
|   |
|   |
|   |
|   |
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |
|   |   |   | . |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | Q | F | V | Q | H | M | L | Q | H | H | A | Q | A | L | D | L | A | A | P | M | L | E | R | S | Q | Q | . |
R | T | V | R | S | L | A | L | D | I | Q | L | S | Q | R | E | Q | M | R | Q | M | E | A | M | L | G | R | W | G | Q | P | P | G | E | P | I | S | P | E | H | A | R | M | M | G | M | A | S | E | A | E | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|
|
|
|  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | G | I | F | P | S | D | E | I | V | K | G | S | I | S | G | Y | V | F | E | Q | F | E | I | A | C | Y | T | S | L | L | A | A | A | K | N | A | G | D | T | A | S | I | P | T | I | E | A | I | L | N | E | E | K | Q | M | A | D | W | L | I | Q | N | I | P | Q | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |
|
|
|
|
|
|   |
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |   |
|   |
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|   |   |
| . | . | . |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|
Template Sequence |   |
A | G | L | S | T | L | P | V | E | Q | A | E | R | Q | F | L | R | L | M | I | R | H | H | Q | G | A | . |
. |
. |
V | A | M | T | L | P | M | L | D | A | R | P | E | V | E | R | L | A | R | Q | I | V | V | T | Q | R | G | E | I | R | T | M | E | G | V | L | G | R | L |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | G | G | G | G |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
|
|
. | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|