Job Description P32694 Confidence 6.26% Date Thu Jan 5 11:50:16 GMT 2012 Rank 20 Aligned Residues 99 % Identity 17% Template c3rjoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: crystal structure of erap1 peptide binding domain Resolution 2.30 Å

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		130	.	.	.	.	.	.	.	.							.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		Y	I	N	E	N	N	E	S	Y	.	.	.	.	.	.	L	K	A	Q	F	E	K	L	S	Q	R	D	M	K	K	Y	L	G	E	M	K	R	L	A	D	G	G	E	M	N	F	D	G	Y	L	D	K	M	S	H	L	V	N	E	G	T	L	D	P	D	I	L	S	K	M	R	D	A	A	P	Q	L	I	S	F
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		I	V	H	Y	E	D	D	G	W	D	S	L	T	G	L	L	K	G	T	H	T	A	V	S	S	N	D	R	A	S	L	I	N	N	A	F	Q	L	V	S	I	G	K	L	S	I	E	K	A	L	D	L	S	L	Y	L	K	H	E	.	.	.	.	.	T	E	I	M	P	V	F	Q	G	L	N	E	L	I	P	M
Template Known Secondary structure																					G	G	G	S																			T	S	S										G	G	G	G	G		.	.	.	.	.		S
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.						.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	F	D	P	T	S	K	E	E	I	K	I	L	T	D	T	S	K	L	I	Y	D	L	F	G	V	K	S	E	K
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		Y	K	L	M	E	K	R	D	M	N	E	V	E	.	.	T	Q	F	K	A	F	L	I	R	L	L	R	D	L	I	D	K
Template Known Secondary structure						T	T	S	S						.	.
Template Predicted Secondary structure															.	.
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.			.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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