Job Description P33347 Confidence 8.34% Date Thu Jan 5 11:51:48 GMT 2012 Rank 21 Aligned Residues 48 % Identity 21% Template c3u02C_ PDB info PDB header:transcription Chain: C: PDB Molecule:putative transcription-associated protein tfiis; PDBTitle: crystal structure of the trna modifier tias from pyrococcus furiosus,2 northeast structural genomics consortium target pfr225 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		S	V	Y	R	L	E	R	F	R	L	R	P	T	F	H	Q	R	D	R	E	D	A	D	P	L	I	.	.	.	.	N	D	A	L	I	Y	I	R	D	E	C	I	D	E	R	K	L	R	G	E	S	P	E	T	V	I	A	I	F	N	R
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.
Template Sequence		S	V	F	Y	A	D	K	W	S	Y	P	F	T	Y	D	N	V	D	P	Y	K	R	T	V	L	I	T	P	H	G	K	D	P	V	L	V	.	.	.	.	.	.	.	.	.	G	I	R	G	I	D	V	G	K	I	L	Q	V	F	E	X
Template Known Secondary structure								G	G	G	T	T	S		T	T				S				S							T	T		S				.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.										.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions