Job Description P25535 Confidence 98.49% Date Thu Jan 5 11:42:02 GMT 2012 Rank 215 Aligned Residues 153 % Identity 18% Template d1kifa1 SCOP info Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.												.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	V	A	I	V	G	G	G	M	V	G	L	A	V	A	C	G	L	Q	G	S	G	L	.	.	.	.	.	.	R	V	A	V	L	E	Q	R	V	Q	E	P	L	A	A	N	A	P	P	Q	L	R	V	S	A	I	N	.	.	.	.	.	.	.	.	.	.	.	A	A	S	E	K	L	L	T	R	L	G	V
Query Conservation																										.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	R	V	V	V	I	G	A	G	V	I	G	L	S	T	A	L	C	I	H	E	R	Y	H	S	V	L	Q	P	L	D	V	K	V	Y	A	D	R	F	T	P	F	T	T	T	D	V	A	A	G	L	W	Q	P	Y	T	S	E	P	S	N	P	Q	E	A	N	W	N	Q	Q	T	F	N	Y	L	L	S	H	I	G
Template Known Secondary structure										S															T	T	T	S	S	S								S			T	T	S	S	S	G	G	G	S			B					S	S			S	S	T															T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	D	I	L	S	R	R	A	S	C	Y	H	G	M	E	V	W	D	K	D	S	F	G	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	D	D	Q	S	M	G	Y	S	H	L	G	H	I	V	E	N	S	V	I	H	Y	A	L	W	N	K	A	H	Q	S	S	D	I	T	L
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	N	A	A	N	M	G	L	T	P	V	S	G	Y	N	L	F	R	E	A	V	P	D	P	Y	W	K	D	M	V	L	G	F	R	K	L	T	P	R	E	L	D	M	F	P	D	Y	R	Y	G	W	F	N	T	S	L	I	L	E	G	R	K	Y	L	Q	W	L	T	E	R	L	T	E	R	G	V	K	F	F
Template Known Secondary structure		S	T	T	T	T	T	T	T											S	S						T	T	T	T	T	S												T	T	S	T	T																												T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	P	A	E	L	Q	Q	V	A	W	G	E	N	E	T	F	L	T	L	K	D	G	S	M	L	T	A	R	L	V	I	G	A	D	G	A	N	S	W
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	V	E	S	F	E	E	V	A	R	G	G	A	D	V	I	I	N	C	T	G	V	W	A	G
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.												T	T		S							G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161														.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions