Job Description P25535 Confidence 100.00% Date Thu Jan 5 11:42:02 GMT 2012 Rank 10 Aligned Residues 376 % Identity 14% Template c3nixF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:flavoprotein/dehydrogenase; PDBTitle: crystal structure of flavoprotein/dehydrogenase from cytophaga2 hutchinsonii. northeast structural genomics consortium target chr43. Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	V	A	I	V	G	G	G	M	V	G	L	A	V	A	C	G	L	Q	G	S	G	L	R	V	A	V	L	E	Q	R	V	Q	E	P	L	A	A	N	A	P	P	Q	L	R	V	S	A	I	N	A	A	S	E	K	L	L	T	R	L	G	V	W	Q	D	I	L	S	R	R	A	S	C	Y	H	G	M	E	V
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		V	D	V	L	V	I	G	A	G	P	A	G	T	V	A	A	S	L	V	N	K	S	G	F	K	V	K	I	V	E	K	Q	K	F	P	R	F	V	I	G	E	S	.	.	.	.	.	.	.	L	L	P	R	C	X	E	H	L	D	E	A	G	F	L	D	A	V	K	A	Q	G	F	Q	Q	K	F	G	A	K	F
Template Known Secondary structure										S													T	T								S	S		S	S				S			B	.	.	.	.	.	.	.			T	T									T								T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		W	D	K	D	S	F	G	H	I	S	F	D	D	Q	S	M	G	Y	S	H	L	G	H	I	V	E	N	S	V	I	H	Y	A	L	W	N	K	A	H	Q	S	S	D	I	T	L	L	A	P	A	E	L	Q	Q	V	A	W	G	E	N	E	T	F	L	T	.	.	.	L	K	D	G	S	M	L	T	A	R	L	V
Query Conservation																																																																			.	.	.
Alig confidence																																																																			.	.	.
Template Conservation
Template Sequence		V	R	G	K	E	I	A	D	F	N	F	S	D	Q	F	S	N	G	W	N	W	T	W	Q	V	P	R	G	N	F	D	K	T	L	A	D	E	A	A	R	Q	G	V	D	V	E	Y	E	V	G	V	T	D	I	K	F	F	G	T	D	S	V	T	T	I	E	D	I	N	G	N	K	R	E	I	E	A	R	F	I
Template Known Secondary structure				T	T							T	T	S		S	S		S		S																					T	T						S										T	T									T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	D	G	A	N	S	W	L	R	N	K	A	D	I	P	L	T	F	W	D	Y	Q	H	H	A	L	V	A	T	I	R	T	E	E	P	H	D	A	V	A	R	Q	V	F	H	G	E	G	I	L	A	F	L	P	L	S	D	P	H	L	C	S	I	V	W	S	L	S	P	E	E	A	Q	R	M	Q	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	A	S	G	Y	G	R	V	I	P	R	X	F	G	L	D	K	P	S	G	F	E	S	R	R	T	L	F	T	H	I	K	D	V	K	R	P	V	G	N	R	I	T	A	V	V	H	K	P	K	V	W	I	W	V	I	P	F	S	N	G	N	T	S	V	G	F	V	G	E	P	S	Y	F	D	E	Y	T	G
Template Known Secondary structure						G	G	G							T	T						S	S													T	T														T	T									T	T	S														T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		S	E	D	E	F	N	R	A	L	N	I	A	F	D	.	.	.	N	R	L	G	L	C	K	V	E	S	A	R	Q	V	F	P	L	T	G	R	Y	A	R	Q	F	A	S	H	R	L	A	L	V	G	D	A	A	H	T	I	H	P	L	A	G	Q	G	V	N	L	G	F	M	D	A	A	E	L	I	A	E	L	K
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		T	P	E	E	R	X	R	A	X	I	A	N	E	G	H	I	A	E	R	F	K	S	E	E	F	L	F	E	P	R	T	I	E	G	Y	A	I	S	A	S	K	L	Y	G	D	G	F	V	L	T	G	N	A	T	E	F	L	D	P	I	F	S	S	G	A	T	F	A	X	E	S	G	S	K	G	G	K	L	A	V
Template Known Secondary structure												T	T		T	T	T					T	T			B	S	S													S		S			T	T					G	G	G	T		B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.						350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.						.	380	.	.	.	.			.
Predicted Secondary structure																																		.	.	.	.	.																														.	.	.	.	.							.	.
Query SS confidence																																		.	.	.	.	.																														.	.	.	.	.							.	.
Query Sequence		R	L	H	R	Q	G	K	D	I	G	Q	Y	I	Y	L	R	R	Y	E	R	S	R	K	H	S	A	A	L	M	L	A	G	.	.	.	.	.	M	Q	G	F	R	D	L	F	S	G	T	N	P	A	K	K	L	L	R	D	I	G	L	K	L	A	D	T	L	.	.	.	.	.	P	G	V	K	P	Q	.	.	L
Query Conservation																																		.	.	.	.	.																														.	.	.	.	.							.	.
Alig confidence										.	.	.	.																					.	.	.	.	.																														.	.	.	.	.							.	.
Template Conservation										.	.	.	.
Template Sequence		Q	F	L	K	G	E	E	V	.	.	.	.	N	W	E	K	D	F	V	E	H	X	X	Q	G	I	D	T	F	R	S	F	V	T	G	W	Y	D	G	T	L	H	A	V	F	F	A	K	N	P	D	P	D	H	K	R	X	I	C	S	V	L	A	G	Y	V	W	D	K	N	N	P	F	V	K	K	H	N	T	I
Template Known Secondary structure						T				.	.	.	.						T																				T	S							T		S	S														T	T		T	T		T	T	S					T	T	T	T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.					.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		386	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Q	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	T	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions