Job Description P25535 Confidence 100.00% Date Thu Jan 5 11:42:02 GMT 2012 Rank 9 Aligned Residues 384 % Identity 16% Template c3e1tA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:halogenase; PDBTitle: structure and action of the myxobacterial chondrochloren2 halogenase cndh, a new variant of fad-dependent halogenases Resolution 2.05 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	V	D	V	A	I	V	G	G	G	M	V	G	L	A	V	A	C	G	L	Q	G	S	G	L	R	V	A	V	L	E	Q	R	V	Q	E	P	L	A	A	N	A	P	P	Q	L	R	V	S	A	I	N	A	A	S	E	K	L	L	T	R	L	G	V	W	Q	D	I	L	S	R	R	A	S	C	Y	H	G	M
Query Conservation
Alig confidence																																													.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		E	V	F	D	L	I	V	I	G	G	G	P	G	G	S	T	L	A	S	F	V	A	M	R	G	H	R	V	L	L	L	E	R	E	A	F	P	R	H	Q	I	G	E	.	.	.	.	.	.	S	L	L	P	A	T	V	H	G	I	C	A	M	L	G	L	T	D	E	M	K	R	A	G	F	P	I	K	R	G	G
Template Known Secondary structure												S												T	T	T								S	S		S	S				S			.	.	.	.	.	.	B							T	T					T	T							T	T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure									.	.																																																						.	.	.	.
Query SS confidence									.	.																																																						.	.	.	.
Query Sequence		E	V	W	D	K	D	S	.	.	F	G	H	I	S	F	D	D	Q	S	M	G	Y	S	H	L	G	H	I	V	E	N	S	V	I	H	Y	A	L	W	N	K	A	H	Q	S	S	D	I	T	L	L	A	P	A	E	L	Q	Q	V	A	W	G	.	.	.	.	E	N	E	T	F	L	T	L	K	D	G	S	M	L
Query Conservation									.	.																																																						.	.	.	.
Alig confidence									.	.																																																						.	.	.	.
Template Conservation
Template Sequence		T	F	R	W	G	K	E	P	E	P	W	T	F	G	F	T	R	H	P	D	D	P	Y	G	F	A	Y	Q	V	E	R	A	R	F	D	D	M	L	L	R	N	S	E	R	K	G	V	D	V	R	E	R	H	E	V	I	D	V	L	F	E	G	E	R	A	V	G	V	R	Y	R	N	T	E	G	V	E	L	M	A
Template Known Secondary structure						S	S		S	S						S	S	S	S	S	S	S	T	T					B																	T	T					S	S										T	T										S	S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		T	A	R	L	V	I	G	A	D	G	A	N	S	W	L	R	N	K	A	D	I	P	L	T	F	W	D	Y	Q	H	H	A	L	V	A	T	I	R	.	.	.	.	T	E	E	P	H	D	A	V	A	R	Q	V	F	H	G	E	G	I	L	A	F	L	P	L	S	D	P	H	L	C	S	I	V	W	S	L	S	P
Query Conservation																																								.	.	.	.
Alig confidence																																								.	.	.	.
Template Conservation
Template Sequence		H	A	R	F	I	V	D	A	S	G	N	R	T	R	V	S	Q	A	V	G	E	R	V	Y	S	R	F	F	Q	N	V	A	L	Y	G	Y	F	E	N	G	K	R	L	P	A	P	R	Q	G	N	I	L	S	A	A	F	Q	D	G	W	F	W	Y	I	P	L	S	D	T	L	T	S	V	G	A	V	V	S	R	E
Template Known Secondary structure												T	T		S	S	G	G	G	T							S	T	T											S					S	T	T		T	T	S							T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.									.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		E	E	A	Q	R	M	Q	Q	A	S	E	D	E	F	N	R	A	L	N	I	A	F	D	N	R	L	G	L	C	K	V	E	S	.	.	.	.	.	.	.	.	A	R	Q	V	F	P	L	T	G	R	Y	A	R	Q	F	A	S	H	R	L	A	L	V	G	D	A	A	H	T	I	H	P	L	A	G	Q	G	V	N
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence							.	.																											.	.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		A	A	E	A	I	.	.	K	D	G	H	E	A	A	L	L	R	Y	I	D	R	C	P	I	I	K	E	Y	L	A	P	A	T	R	V	T	T	G	D	Y	G	E	I	R	I	R	K	D	Y	S	Y	C	N	T	S	F	W	K	N	G	M	A	L	V	G	D	A	A	C	F	V	D	P	V	F	S	S	G	V	H
Template Known Secondary structure				T	T	T	.	.	S	S												T	S								T	T						S	S	T	T	S	S						S						S		S	B		S	S					G	G	G	T					S	T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	F	M	D	A	A	E	L	I	A	E	L	K	R	L	H	R	Q	G	K	D	I	G	Q	Y	I	Y	L	R	R	Y	E	R	S	R	K	H	S	A	A	L	M	L	A	G	M	Q	G	F	R	D	L	F	S	G	T	N	P	A	K	K	L	L	R	D	I	G	L	K	L	A	D	T	L	P	G	V	K	P
Query Conservation
Alig confidence																							.	.																																												.	.	.	.
Template Conservation																							.	.																																												.	.	.	.
Template Sequence		L	A	T	Y	S	A	L	L	V	A	R	A	I	N	T	C	L	A	G	E	M	.	.	S	E	Q	R	C	F	E	E	F	E	R	R	Y	R	R	E	Y	G	N	F	Y	Q	F	L	V	A	F	Y	D	M	N	Q	D	T	D	S	Y	F	W	S	A	R	K	.	.	.	.	I	I	N	T	E	E	R	A	N	E
Template Known Secondary structure																		T	T	T		S	.	.																																		T	T						T	S	S	.	.	.	.				S
Template Predicted Secondary structure																							.	.																																												.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.					.	.	.	.	.	.	.	.	390	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	R	Q	A	M	G	L	N	D	L	P	E	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	V	R	L	I	A	G	R	S	N	L	D	E	P	V
Template Known Secondary structure								T	T				T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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