Return to main results Retrieve Phyre Job Id

Job DescriptionP25535
Confidence100.00%DateThu Jan 5 11:42:02 GMT 2012
Rank11Aligned Residues354
% Identity21%Templatec2x3nA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable fad-dependent monooxygenase; PDBTitle: crystal structure of pqsl, a probable fad-dependent2 monooxygenase from pseudomonas aeruginosa
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  QSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVQEPLAANAPPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGM
Query Conservation     

 




 


  
  

  
  
 
 

                  
       
  


               
Alig confidence 




































.........



























.




Template Conservation     

 




 


  
  
   
  
 
 

    .........
    
       
  


         .     
Template Sequence  NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE. . . . . . . . . NGADLLKPAGIRVVEAAGLLAEVTRRGG. RVRHE
Template Known Secondary structure 


STT


SS


.........




TT
TT
.
Template Predicted Secondary structure 













.........








.



Template SS confidence 















































































   4.....10.........20.........30.........40 .........50.........60........ .70...
 
   82.......90.........100.........110.........120.........130.........140. ........150.........
Predicted Secondary structure 































..















Query SS confidence 



























































. .

















Query Sequence  EVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNKAHQSSDITLLAPAELQQVAWG. . ENETFLTLKDGSMLTARL
Query Conservation                            
 
  
   
                        ..                  
Alig confidence 



























































..

















Template Conservation                                     
                                            
Template Sequence  LEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRV
Template Known Secondary structure  TTTTSS
GGG


TT
TT
S


TTS
TTS
Template Predicted Secondary structure 











































Template SS confidence 















































































   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   160.........170.... .....180.........190.........200....... ..210.........220.........230.......
Predicted Secondary structure 








.
















.











Query SS confidence 














.
































.





























Query Sequence  VIGADGANSWLRNKA. DIPLTFWDYQHHALVATIRTEEPHDAVARQVFH. GEGILAFLPLSDPHLCSIVWSLSPEEAQRM
Query Conservation 

 


  
  
  
.                                 .  
                           
Alig confidence 














.
































.





























Template Conservation                                                                                  
Template Sequence  VVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELM
Template Known Secondary structure 


TT
TS








SS




TTS
TTT

Template Predicted Secondary structure 













































Template SS confidence 















































































   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   238.240.........250.... .....260.........270.........280.........290.........300.........310...
Predicted Secondary structure 




....

































Query SS confidence 
















. . . .


























































Query Sequence  QQASEDEFNRALNIAFD. . . . NRLGLCKVESARQVFPLTGRYARQFASHRLALVGDAAHTIHPLAGQGVNLGFMDAAELI
Query Conservation                   ....                             
 






   
  


 
 

 

  

Alig confidence 
















....


























































Template Conservation                                                    
 





    
  
 
   

 

  

Template Sequence  ADTRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALA
Template Known Secondary structure  STTSTT

GGGT


STT






S
STT
GGGT

GGG

Template Predicted Secondary structure 






































Template SS confidence 















































































   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   314.....320.........330.........340.........350.........360.......
Predicted Secondary structure 









Query SS confidence 





















































Query Sequence  AELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGTNPAKKLL
Query Conservation    
               
  
   
                            
Alig confidence 











..







































Template Conservation    
         ..    
  
   
                            
Template Sequence  DALDLALRDACA. . LEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVF
Template Known Secondary structure  TTSS
..TT
Template Predicted Secondary structure 




..









Template SS confidence 





















































   317..320........ .330.........340.........350.........360........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions