Job Description P25535 Confidence 99.96% Date Thu Jan 5 11:42:02 GMT 2012 Rank 27 Aligned Residues 336 % Identity 15% Template c2weuD_ PDB info PDB header:antifungal protein Chain: D: PDB Molecule:tryptophan 5-halogenase; PDBTitle: crystal structure of tryptophan 5-halogenase (pyrh) complex2 with substrate tryptophan Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.
Predicted Secondary structure																											.	.	.																																													.	.
Query SS confidence																											.	.	.																																													.	.
Query Sequence		M	Q	S	V	D	V	A	I	V	G	G	G	M	V	G	L	A	V	A	C	G	L	Q	G	S	.	.	.	G	L	R	V	A	V	L	E	Q	R	V	Q	E	P	L	A	A	N	A	P	P	Q	L	R	V	S	A	I	N	A	A	S	E	K	L	L	T	R	L	G	V	W	Q	D	.	.	I	L	S	R	R	A
Query Conservation																											.	.	.																																													.	.
Alig confidence					.	.																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation					.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	S	.	.	V	V	I	V	G	G	G	T	A	G	W	M	T	A	S	Y	L	K	A	A	F	D	D	R	I	D	V	T	L	V	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	G	E	A	T	F	S	T	V	R	H	F	F	D	Y	L	G	L	D	E	R	E	W	L	P	R	C	A	G
Template Known Secondary structure					.	.																						G	G	G	S								.	.	.	.	.	.	.	.	.	.	.	.	.								T	T									T							T	T	T	T	T
Template Predicted Secondary structure					.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.														.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																																																											.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	C	Y	H	G	M	E	V	W	D	K	D	S	F	G	H	I	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	Q
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	K	L	G	I	R	F	E	N	W	S	E	P	G	E	Y	F	Y	H	P	F	E	R	L	R	V	V	D	G	F	N	M	A	E	W	W	L	A	V	G	D	T	S	F	S	E	A	C	Y	L	T	H	R	L	C	E	A	K	R	A	P	R	M	L	D	G	S	L	F	A	S	L	G	R	S	T	L	A	E
Template Known Secondary structure											S	S	S	S	T	T							S							T	T											T																	T	T	B		S	B		T	T	S		B						S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		S	M	G	Y	S	H	L	G	H	I	V	E	N	S	V	I	H	Y	A	L	W	N	K	A	H	Q	S	S	D	I	T	L	L	A	P	A	E	L	Q	Q	V	A	W	G	E	N	E	T	F	L	T	L	K	D	G	S	M	L	T	A	R	L	V	I	G	A	D	G	A	N	S	W	.	L	R	N	K	A	D	I
Query Conservation																																																																										.
Alig confidence																																																																										.
Template Conservation
Template Sequence		Q	R	A	Q	F	P	Y	A	Y	H	F	D	A	D	E	V	A	R	Y	L	S	E	Y	A	I	A	R	G	V	R	H	V	V	D	D	V	Q	H	V	G	Q	D	E	R	G	W	I	S	G	V	H	T	K	Q	H	G	E	I	S	G	D	L	F	V	D	C	T	G	F	R	G	L	L	I	N	Q	T	L	G	G
Template Known Secondary structure				S																								T	T															T	T	S								S	S	S						S							G	G	G								T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		P	L	T	F	W	D	Y	Q	.	.	.	.	.	H	H	A	L	V	A	T	I	R	T	E	E	P	H	D	A	V	A	R	Q	V	F	H	G	E	G	I	L	A	F	L	P	L	S	D	P	H	L	C	S	I	V	W	S	L	S	P	E	E	A	Q	R	M	Q	Q	A	S	E	D	E	F	N	R	A	L	N	I
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																																																.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.
Template Sequence		R	F	Q	S	F	S	D	V	L	P	N	N	R	A	V	A	L	R	V	P	R	E	N	D	E	D	M	R	P	Y	T	T	A	T	A	M	S	A	G	W	M	W	T	I	P	L	F	K	R	D	G	N	G	Y	V	Y	S	D	E	F	.	.	.	.	.	.	.	.	I	S	P	E	E	A	E	R	E	L	R	S
Template Known Secondary structure							T	T	T														S	S	G	G	G			S	S							T	T									S	S										T	T	T	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.									300	.	.	.	.	.	.	.	.	.	310	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	D	N	R	L	G	L	C	K	V	E	S	A	R	Q	V	F	P	L	T	G	R	Y	A	R	Q	F	A	S	H	R	L	A	L	V	G	D	A	A	H	T	I	H	P	L	A	G	Q	G	V	N	L	G	F	M	D	A	A	E	L	I	A	E	L	K	R	L	H	R	Q	G	K	D	I	G	Q	Y	I	Y
Query Conservation
Alig confidence			.	.	.	.																																																													.	.	.	.	.	.
Template Conservation			.	.	.	.																																																													.	.	.	.	.	.
Template Sequence		T	.	.	.	.	V	A	P	G	R	D	D	L	E	A	N	H	I	Q	M	R	I	G	R	N	E	R	T	W	I	N	N	C	V	A	V	G	L	S	A	A	F	V	E	P	L	E	S	T	G	I	F	F	I	Q	H	A	I	E	Q	L	V	K	H	F	.	.	.	.	.	.	P	G	E	R	W	D	P	V	L
Template Known Secondary structure			.	.	.	.			T	T		T	T	S													S		S			T	T					S	T	T	T					G	G	G																	T		.	.	.	.	.	.			T	T
Template Predicted Secondary structure			.	.	.	.																																																													.	.	.	.	.	.
Template SS confidence
		312					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.	380	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		L	R	R	Y	E	R	S	R	K	H	S	A	A	L	M	L	A	G	M	Q	G	F	R	D	L	F	S	G	T	N	.	P	A	K	K	L	L	R	D
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		I	S	A	Y	N	E	R	M	A	H	M	V	D	G	V	K	E	F	L	V	L	H	Y	K	G	A	Q	R	E	D	T	P	Y	W	K	A	A	K	T
Template Known Secondary structure																																S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low