Return to main results Retrieve Phyre Job Id

Job DescriptionP25535
Confidence100.00%DateThu Jan 5 11:42:02 GMT 2012
Rank8Aligned Residues367
% Identity21%Templatec2r0gB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:rebc; PDBTitle: chromopyrrolic acid-soaked rebc with bound 7-carboxy-k252c
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  SVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVQEPLAANAPPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGME
Query Conservation    

 




 


  
  

  
  
 
 

                  
       
  


                
Alig confidence 









































......































Template Conservation    











  
  


 

 
 



        

......  
   
  

  


   
            
Template Sequence  ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRV. . . . . . GTIGPRSMELFRRWGVAKQIRTAGWPGDHPLD
Template Known Secondary structure 

STTT


SS
S

SS


......

TT
TSS

TTS


Template Predicted Secondary structure 


















......










Template SS confidence 















































































   6...10.........20.........30.........40....... ..50.........60.........70.........
 
   83...... 90.........100.........110.........120. ........130.........140.........150.
Predicted Secondary structure 



..........










.


























Query SS confidence 






. . . . . . . . . .































.





























Query Sequence  VWDKDSF. . . . . . . . . . GHISFDDQSMGYSHLGHIVENSVIHYALWNKA. HQSSDITLLAPAELQQVAWGENETFLTLKD
Query Conservation         ..........                  
 
  
   
    .                              
Alig confidence 






..........































.





























Template Conservation                                          
                                       
Template Sequence  AAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGERLRTRSRLDSFEQRDDHVRATITDLRTGA
Template Known Secondary structure  SSBTS




TTTS


SS
SS



GGG
S
SS
TTT

Template Predicted Secondary structure 



































Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150.........
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  GSMLTARLVIGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPHLCSIVWSLSP
Query Conservation          

 


  
  
  
                                   
                     
Alig confidence 















































....



























Template Conservation       
  





  
 

  

                        ....                            
Template Sequence  TRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRS. . . . LLGERAALFFFLMLSSSLRFPLRALDGR
Template Known Secondary structure 


TT
TT



BSS


TT....GGG

S
S
SSS
SSSSS
Template Predicted Secondary structure 




























....













Template SS confidence 















































































   160.........170.........180.........190.........200....... ..210.........220.........230.....
 
   232.......240.........250.........260.........270.........280.........290.........300.........310.
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  EEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFASHRLALVGDAAHTIHPLAGQGVNLGFMDAAE
Query Conservation                                                      
 






   
  


 
 

 

  
Alig confidence 



























..

















































Template Conservation                              ..              
     


 






   
  


 
 

 

 
Template Sequence  GLYRLTVGVDTMDSFELVRRAVAFDTEI. . EVLSDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAAD
Template Known Secondary structure  S



B
S



..

BB
S
STT
GGGTB


STTS
Template Predicted Secondary structure 











..































Template SS confidence 















































































   236...240.........250.........260... ......270.........280.........290.........300.........310...
 
   312.......320.........330.........340.........350.........360 .........370.........380..
Predicted Secondary structure 








.........

Query SS confidence 
















































. . . . . . . . .





















Query Sequence  LIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGT. . . . . . . . . NPAKKLLRDIGLKLADTLPGVK
Query Conservation 

  
               
  
   
                     .........       
   
      
   
Alig confidence 















...





























.........





















Template Conservation 





 
  
 
   ...

 

  

 
 
                                 
              
Template Sequence  LGWKLAATLRGWAGPG. . . LLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDDGPRGERIRAAVAEKLERSGARR
Template Known Secondary structure  T
S
TT...TTT



SS
S
SSTGGG
Template Predicted Secondary structure 




...















Template SS confidence 















































































   319320.........330.... .....340.........350.........360.........370.........380.........390.....
 
   383.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  PQ
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  EF
Template Known Secondary structure  GG
Template Predicted Secondary structure 
Template SS confidence 

   396.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions