Job Description P25535 Confidence 99.22% Date Thu Jan 5 11:42:02 GMT 2012 Rank 76 Aligned Residues 298 % Identity 11% Template c2q7vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of deinococcus radiodurans thioredoxin2 reductase Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		Q	S	V	D	V	A	I	V	G	G	G	M	V	G	L	A	V	A	C	G	L	Q	G	S	G	L	R	V	A	V	L	E	Q	R	V	Q	.	.	.	.	E	P	L	A	A	N	A	P	P	Q	L	R	V	S	A	I	N	A	A	S	E	K	L	L	T	R	L	G	V	W	Q	D	I	L	S	R	R	A	S	C
Query Conservation																																						.	.	.	.
Alig confidence																																						.	.	.	.
Template Conservation
Template Sequence		H	D	Y	D	V	V	I	I	G	G	G	P	A	G	L	T	A	A	I	Y	T	G	R	A	Q	L	S	T	L	I	L	E	K	G	M	P	G	G	Q	I	A	W	S	E	E	V	E	N	F	P	G	F	P	E	P	I	A	G	M	E	L	A	Q	R	M	H	Q	Q	A	E	K	F	G	A	K	V	E	M	D	E
Template Known Secondary structure												S													T	T								S	S		T	T	G	G	G	G	G		S		B			S	T	T		S	S		B																T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	G	M	E	V	W	D	K	D	S	F	G	H	I	S	F	D	D	Q	S	M	G	Y	S	H	L	G	H	I	V	E	N	S	V	I	H	Y	A	L	W	N	K	A	H	Q	S	S	D	I	T	L	L	A	P	A	E	L	Q	Q	V	A	W	G	E	N	E	T	F	L	T	L	K	D	G	S	M	L	T	A
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	G	V	Q	H	D	A	T	S	H	P	Y	P	F	T	V	R	G	Y	N	G	E	Y	R	A	K	A	V	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	G	A	D	P	R	K	L	G	I	P	G	E	D	N	F	W	G	K	G	V	S	T	C	A	T	C	D	G	F	F
Template Known Secondary structure									T	T	S	S	S								S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	T	T	T	T	B	T	T	T			S						G	G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		R	L	V	I	G	A	D	G	A	N	S	W	L	R	N	K	A	D	I	P	L	T	F	W	D	Y	Q	H	H	A	L	V	A	T	I	R	T	E	E	P	H	D	A	V	A	R	Q	V	F	H	G	E	G	I	L	A	F	.	.	.	.	.	L	P	L	S	D	P	H	L	C	S	I	V	W	S	L	S	P	E
Query Conservation																																																											.	.	.	.	.
Alig confidence																																																											.	.	.	.	.
Template Conservation
Template Sequence		Y	K	G	K	K	V	V	V	I	G	G	G	D	A	A	V	E	E	G	M	F	L	T	K	F	A	D	E	V	T	V	I	H	R	R	D	T	L	R	A	N	K	V	A	Q	A	R	A	F	A	N	P	K	M	K	F	I	W	D	T	A	V	E	E	I	Q	G	A	D	S	V	S	G	V	K	L	R	N	L	K
Template Known Secondary structure		G	T	T									S											T	T	T		S							S	S	S	S			S										T		T	T						S									S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	Q	R	M	Q	Q	A	S	E	D	E	F	N	R	A	L	N	I	A	F	D	N	R	L	G	L	C	K	V	E	S	A	R	Q	V	F	P	L	T	G	R	Y	A	R	Q	F	A	S	H	R	L	A	L	V	G	D	A	A	H	T	I	H	P	L	A	G	Q	G	V	N	L	G	F	M	D	A	A	E	L
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		T	G	E	V	S	E	L	A	T	D	G	V	F	I	F	I	G	H	V	P	N	T	A	F	V	K	D	T	V	S	L	R	D	D	G	Y	V	D	V	R	D	E	I	Y	T	.	.	N	I	P	M	L	F	A	A	G	D	V	S	D	Y	I	Y	R	Q	L	A	T	S	V	G	A	G	T	R	A	A	M	M	T
Template Known Secondary structure		T									S						S					S		G	G	G	T	T	T	S		B		T	T	S		B			B	T	T	T	B		.	.	S	S	T	T					S	T	T	T		S	S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		313	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E	L	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	Q	L	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions