Return to main results Retrieve Phyre Job Id

Job DescriptionP25535
Confidence100.00%DateThu Jan 5 11:42:02 GMT 2012
Rank3Aligned Residues353
% Identity19%Templatec2dkhA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-hydroxybenzoate hydroxylase; PDBTitle: crystal structure of 3-hydroxybenzoate hydroxylase from comamonas2 testosteroni, in complex with the substrate
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20..... ....30.........40.........50.........60.........70.........80
Predicted Secondary structure 







.




























Query SS confidence 























.






















































Query Sequence  QSVDVAIVGGGMVGLAVACGLQGS. GLRVAVLEQRVQEPLAANAPPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHG
Query Conservation     

 




 


  
  

  .
  
 
 

                  
       
  


              
Alig confidence 























.


















......





























Template Conservation     











 

  


  

 
 



        

......  
   




  


   
          
Template Sequence  SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQA. . . . . . DGIACRTMEMFEAFEFADSILKEACWINDV
Template Known Secondary structure  S

STT
TTS

SSSS

SS
S
......

TT
S
Template Predicted Secondary structure 




















......









Template SS confidence 















































































   31........40.........50.........60.........70.... .....80.........90.........100....
 
   81........90 .........100.........110.........120..... ....130.........140.......
Predicted Secondary structure 



......











.





















......
Query SS confidence 









. . . . . .


































.





















. . . . . .
Query Sequence  MEVWDKDSFG. . . . . . HISFDDQSMGYSHLGHIVENSVIHYALWNKAHQSS. DITLLAPAELQQVAWGENETFL. . . . . .
Query Conservation            ......                 
 
  
   
        .                      ......
Alig confidence 









......


































.





















......
Template Conservation                                   
 
  
   
          
    
  
                  
Template Sequence  TFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTL
Template Known Secondary structure 
TTSTT
SS
TTS
SS


STT



B
S
TT
SS

Template Predicted Secondary structure 

































Template SS confidence 















































































   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   148.150.........160.........170.........180.........190.. .......200.........210.........
Predicted Secondary structure  ......




























..












Query SS confidence  . . . . . .












































. .


























Query Sequence  . . . . . . TLKDGSMLTARLVIGADGANSWLRNKADIPLTFWDYQHHALVATI. . RTEEPHDAVARQVFHGEGILAFLPLSD
Query Conservation  ......            

 


  
  
  
                  ..                 
         
Alig confidence  ......












































..


























Template Conservation               
 

 





  
 

  

                                          
   
Template Sequence  ERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPREG
Template Known Secondary structure 
SGGGTT



TT
TT



S
S



TTTTSTT
TT
Template Predicted Secondary structure 










































Template SS confidence 















































































   185....190.........200.........210.........220.........230.........240.........250.........260....
 
   220.........230.........240.........250.........260.........270.........280 .......
Predicted Secondary structure 
































............

Query SS confidence 




























































. . . . . . . . . . . .






Query Sequence  PHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFA. . . . . . . . . . . . SHRLALV
Query Conservation                                                               ............   
 

Alig confidence 










........









































............






Template Conservation             ........                                                       


 

Template Sequence  GHLVRFYVEMD. . . . . . . . NITVEQLIATAQRVLHPYKLEVKNVPWWSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIA
Template Known Secondary structure  SS


........


TTS





S
SBS


SS

TTS




Template Predicted Secondary structure 



........



































Template SS confidence 















































































   265....270..... ....280.........290.........300.........310.........320.........330......
 
   288.290.........300.........310.........320.........330.........340.........350.........360.......
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  GDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGTNPAKKLL
Query Conservation 




   
  


 
 

 

  

  
               
  
   
                            
Alig confidence 




































...







































Template Conservation 




   
  


 
 

 

 






 
  
 
...   

 


 



 
   
  
                 
Template Sequence  GDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQC. . . APELLHTYSSERQVVAQQLIDFDREWAKDPKEFQKYFEQH
Template Known Secondary structure  GGGT

GGG

TTTTSB...
GGGGS


Template Predicted Secondary structure 














...
Template SS confidence 















































































   348.350.........360.........370.........380.... .....390.........400.........410.........420....
 
   368.370.
Predicted Secondary structure 
Query SS confidence 



Query Sequence  RDIG
Query Conservation 
   
Alig confidence 



Template Conservation      
Template Sequence  GRFT
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   439440..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions