Job Description P25535 Confidence 99.97% Date Thu Jan 5 11:42:02 GMT 2012 Rank 25 Aligned Residues 340 % Identity 14% Template c2ardA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:tryptophan halogenase prna; PDBTitle: the structure of tryptophan 7-halogenase (prna) suggests a mechanism2 for regioselective chlorination Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		D	V	A	I	V	G	G	G	M	V	G	L	A	V	A	C	G	L	Q	G	S	.	.	.	G	L	R	V	A	V	L	E	Q	R	V	Q	E	P	L	A	A	N	A	P	P	Q	L	R	V	S	A	I	N	A	A	S	E	K	L	L	T	R	L	G	V	W	Q	D	I	L	S	R	R	A	S	C	Y	H	G	M
Query Conservation																							.	.	.
Alig confidence																							.	.	.																					.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.
Template Sequence		N	I	V	I	V	G	G	G	T	A	G	W	M	A	A	S	Y	L	V	R	A	L	Q	Q	Q	A	N	I	T	L	I	E	S	A	A	I	P	R	I	G	V	G	E	A	.	.	.	.	.	.	T	I	P	S	L	Q	K	V	F	F	D	F	L	G	I	P	E	R	E	W	M	P	Q	V	N	G	A	F	K	A
Template Known Secondary structure									S																S	S									T	T	S				S				B	.	.	.	.	.	.			T						T					T							T	G	G	G	T
Template Predicted Secondary structure																																														.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50							.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90																																																								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	W	D	K	D	S	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	S	F	D	D	Q	S	M	G	Y	S	H	L	G	H
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	K	F	V	N	W	R	K	S	P	D	P	S	R	D	D	H	F	Y	H	L	F	G	N	V	P	N	C	D	G	V	P	L	T	H	Y	W	L	R	K	R	E	Q	G	F	Q	Q	P	M	E	Y	A	C	Y	P	Q	P	G	A	L	D	G	K	L	A	P	C	L	S	D	G	T	R	Q	M	S	H	A	W
Template Known Secondary structure							S		S	S	S			T	T	S									S						T	T												T	T	T			S								S							T	T	B		S	B		T	T			B		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																																	.														.	.	.
Query SS confidence																																																																	.														.	.	.
Query Sequence		I	V	E	N	S	V	I	H	Y	A	L	W	N	K	A	H	Q	S	S	D	I	T	L	L	A	P	A	E	L	Q	Q	V	A	W	G	E	N	E	T	F	L	T	L	K	D	G	S	M	L	T	A	R	L	V	I	G	A	D	G	A	N	S	W	.	L	R	N	K	A	D	I	P	L	T	F	W	D	.	.	.
Query Conservation																																																																	.														.	.	.
Alig confidence																																																																	.														.	.	.
Template Conservation
Template Sequence		H	F	D	A	H	L	V	A	D	F	L	K	R	W	A	V	E	R	G	V	N	R	V	V	D	E	V	V	D	V	R	L	N	N	R	G	Y	I	S	N	L	L	T	K	E	G	R	T	L	E	A	D	L	F	I	D	C	S	G	M	R	G	L	L	I	N	Q	A	L	K	E	P	F	I	D	M	S	D	Y	L
Template Known Secondary structure																			T	T															S	S	S								T	T	S						S						S		T	T								S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		183	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		Y	Q	H	H	A	L	V	A	T	I	R	T	E	E	.	.	.	P	H	D	A	V	A	R	Q	V	F	H	G	E	G	I	L	A	F	L	P	L	S	D	P	H	L	C	S	I	V	W	S	L	S	P	E	E	A	Q	R	M	Q	Q	A	S	E	D	E	F	N	R	A	L	N	I	A	F	D	N	R	L	G	L
Query Conservation																.	.	.
Alig confidence																.	.	.																																		.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		L	C	D	S	A	V	A	S	A	V	P	N	D	D	A	R	D	G	V	E	P	Y	T	S	S	I	A	M	N	S	G	W	T	W	K	I	P	M	L	G	R	F	G	S	G	Y	V	F	S	S	.	.	.	.	.	.	.	.	H	F	T	S	R	D	Q	A	T	A	D	F	L	K	L	W	G	L	.	.	.	.
Template Known Secondary structure																						S	S							S	S									T	T										T	.	.	.	.	.	.	.	.	T	T	S														T		.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290									.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	V	E	S	A	R	Q	V	F	P	L	T	G	R	Y	A	R	Q	F	A	S	H	R	L	A	L	V	G	D	A	A	H	T	I	H	P	L	A	G	Q	G	V	N	L	G	F	M	D	A	A	E	L	I	A	E	L	K	R	L	H	R	Q	G	K	D	I	G	Q	Y	I	Y	L	R	R	Y	E	R	S	R
Query Conservation
Alig confidence		.																																																									.	.	.	.	.	.
Template Conservation		.																																																									.	.	.	.	.	.
Template Sequence		.	S	D	N	Q	P	L	N	Q	I	K	F	R	V	G	R	N	K	R	A	W	V	N	N	C	V	S	I	G	L	S	S	C	F	L	E	P	L	E	S	T	G	I	Y	F	I	Y	A	A	L	Y	Q	L	V	K	H	F	.	.	.	.	.	.	P	D	T	S	F	D	P	R	L	S	D	A	F	N	A	E	I
Template Known Secondary structure		.		T	T														S		S			T	T					G	G	G	S		B			G	G	G																	T		.	.	.	.	.	.		B	T	T
Template Predicted Secondary structure		.																																																									.	.	.	.	.	.
Template SS confidence
			309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.							.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		K	H	S	A	A	L	M	L	A	G	M	Q	G	F	R	D	L	F	S	G	T	N	.	P	A	K	K	L	L	R	D
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		V	H	M	F	D	D	C	R	D	F	V	Q	A	H	Y	F	T	T	S	R	D	D	T	P	F	W	L	A	N	R	H
Template Known Secondary structure																		T					S	S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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