Job Description P25535 Confidence 99.74% Date Thu Jan 5 11:42:02 GMT 2012 Rank 33 Aligned Residues 308 % Identity 13% Template c1yvvB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:amine oxidase, flavin-containing; PDBTitle: x-ray structurure of p. syringae q888a4 oxidoreductase at2 resolution 2.5a. northeast structural genomics consortium3 target psr10. Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	V	A	I	V	G	G	G	M	V	G	L	A	V	A	C	G	L	Q	G	S	G	L	R	V	A	V	L	E	Q	R	V	Q	E	P	L	A	A	N	A	P	P	Q	L	R	V	S	A	I	N	A	A	S	E	K	L	L	T	R	L	G	V	W	Q	D	I	L	S	R	R	A	S	C	Y	H	G	M	E
Query Conservation
Alig confidence																																																							.	.	.	.	.
Template Conservation																																																							.	.	.	.	.
Template Sequence		T	V	P	I	A	I	I	G	T	G	I	A	G	L	S	A	A	Q	A	L	T	A	A	G	H	Q	V	H	L	F	D	K	S	R	G	S	G	G	R	X	S	S	K	R	S	D	A	G	A	L	D	X	G	.	.	.	.	.	A	Q	Y	F	T	A	R	D	R	R	F	A	T	A	V	K	Q	W	Q	A	Q	G
Template Known Secondary structure											S													T	T								S	S	S	S	S		G	G	G						T	T	S					S	.	.	.	.	.				B				S														T
Template Predicted Secondary structure																																																							.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	D	K	D	S	F	G	H	I	S	F	D	D	Q	S	M	G	Y	S	H	L	G	H	I	V	E	N	S	V	I	H	Y	A	L	W	N	K	A	H	Q	S	S	D	I	T	L	L	A	P	A	E	L	Q	Q	V	A	W	G	E	N	E	T	F	L	T	L	K	D	G	S	M	L	T	A	R	L	V	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	A	E	W	T	P	L	L	Y	N	F	H	A	G	R	L	S	P	S	P	D	E	Q	V	R	W	V	G	K	P	G	X	S	A	I	T	R	A	X	R	G	D	X	P	V	S	F	S	C	R	I	T	E	V	F	R	G	E	E	H	W	N	L	L	D	A	E	G	Q	N	H	G	P	F	S	H	V	I	I
Template Known Secondary structure		S												S	S	S							S	S	S						S	S	S	T	T								T	T						S										S	S							T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.							.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																.	.	.	.																																										.	.	.	.	.	.
Query SS confidence																.	.	.	.																																										.	.	.	.	.	.
Query Sequence		A	D	G	A	N	S	W	L	R	N	K	A	D	I	.	.	.	.	P	L	T	F	W	D	Y	Q	H	H	A	L	V	A	T	I	R	T	E	E	P	H	D	A	V	A	R	Q	V	F	H	G	E	G	I	L	A	F	L	P	L	.	.	.	.	.	.	S	D	P	H	L	C	S	I	V	W	S	L	S	P	E
Query Conservation																.	.	.	.																																										.	.	.	.	.	.
Alig confidence																.	.	.	.																																										.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	P	A	P	Q	A	S	T	L	L	A	A	A	P	K	L	A	S	V	V	A	G	V	K	X	D	P	T	W	A	V	A	L	A	F	E	T	P	L	Q	T	P	X	Q	G	C	F	V	Q	D	S	P	L	D	W	L	A	R	N	R	S	K	P	E	R	D	D	T	L	D	T	W	I	L	H	A	T	S	Q
Template Known Secondary structure			S						G	G	G	G	T	T									T	T														S	S			S		S								S	S	S							G	G	G	S	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.										.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		E	A	Q	R	M	Q	Q	A	S	E	D	E	F	N	R	A	L	N	I	A	F	D	N	R	L	G	L	C	K	V	E	S	A	R	Q	V	.	.	.	.	.	.	.	.	.	F	P	L	T	G	R	Y	A	R	Q	F	A	S	H	R	L	A	L	V	G	D	A	A	H	T	I	H	P	L	A	G	Q	G	V	N
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.
Template Sequence		W	S	R	Q	N	L	D	A	S	R	E	Q	V	I	E	H	L	H	G	A	F	A	E	L	I	D	C	T	X	P	A	P	V	F	S	L	A	H	R	W	L	Y	A	R	P	A	G	A	H	E	W	G	A	L	S	D	A	D	L	G	I	Y	V	C	G	D	W	C	L	.	.	.	.	.	.	S	G	R	V	E
Template Known Secondary structure						T	T	T																T	T		S	S						S													S	S					S					T	T	T	T						G	G	G	T	.	.	.	.	.	.	T	S	S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.							.	.	.	.	310
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	F	M	D	A	A	E	L	I	A	E	L	K	R	L	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	W	L	S	G	Q	E	A	A	R	R	L	L	E	H	L	Q
Template Known Secondary structure																		T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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