Job Description P25535 Confidence 99.51% Date Thu Jan 5 11:42:02 GMT 2012 Rank 43 Aligned Residues 301 % Identity 13% Template c1c0iA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-amino acid oxidase; PDBTitle: crystal structure of d-amino acid oxidase in complex with2 two anthranylate molecules Resolution 1.90 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.														.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure				.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Q	.	S	V	D	V	A	I	V	G	G	G	M	V	G	L	A	V	A	C	G	L	Q	G	S	G	L	R	V	A	V	L	E	Q	R	V	Q	E	P	L	A	A	N	A	P	P	Q	L	R	V	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	A	A	S	E	K	L	L	T	R	L	G	V
Query Conservation				.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																																																.	.
Template Sequence		M	H	S	Q	K	R	V	V	V	L	G	S	G	V	I	G	L	S	S	A	L	I	L	A	R	K	G	Y	S	V	H	I	L	A	R	D	L	P	E	D	V	S	S	Q	T	F	A	S	P	W	A	G	A	N	W	T	P	F	M	T	L	T	D	G	P	R	Q	A	K	W	E	E	S	T	F	K	K	W	.	.
Template Known Secondary structure					S									S													T	T								S	S		T	T		T	T		T	T	S	S	G	G	G				B					S		T	T	T																.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		1001	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	D	I	L	S	R	R	A	S	C	Y	H	G	M	E	V	W	D	K	D	S	F	G	H	I	S	F	D	D	Q	S	M	G	Y	S	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	I	V	E	N	S	V	I	H	Y	A	L	W	N	K	A	H	Q	S	S	D	I	T	L
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	L	V	P	T	G	H	A	M	W	L	K	G	T	R	R	F	A	Q	N	E	D	G	L	L	G	H	W	Y	K	D	I	T	P	N	Y	R	P	L	P	S	S	E	C	P	P	G	A	I	G	V	T	Y	D	T	L	S	V	H	A	P	K	Y	C	Q	Y	L	A	R	E	L	Q	K	L	G	A	T	F	E
Template Known Secondary structure					T	T	T	T	S	S											S	S	G	G	G	G	G	G	G	T	T	T	T	T	S	T	T						G	G	G	S		T	T																											T	T
Template Predicted Secondary structure
Template SS confidence
		1079	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	P	A	E	L	Q	Q	V	A	W	G	E	N	E	T	F	L	T	L	K	D	G	S	M	L	T	A	R	L	V	I	G	A	D	G	A	N	S	W	L	R	N	K	A	D	I	P	L	T	F	W	D	Y	Q	H	H	A	L	V	A	T	I	R	T	E	E	P	H	D	A	V	A	R	Q	V	F	H	G	E
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		R	R	T	V	T	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	A	F	D	G	A	D	L	V	V	N	A	T	G	L	G	A	K	S	.	.	.	.	.	I	A	G	I	D	D	Q	A	A	E	P	I	R	G	Q	T	V	L	V	K	S	P	C	K	R	C	T	M	D	S	S	D	P	A
Template Known Secondary structure						S	B	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T		S	S		S							G	G	G	G	G	T	.	.	.	.	.	S	B	T	T			T	T																							S		T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		1159	1160	.	.	.	.	.															.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.						.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	L	A	F	L	P	L	S	D	P	H	L	C	S	I	V	W	S	L	S	P	E	E	A	Q	R	M	Q	Q	A	S	E	D	E	F	N	R	A	L	N	I	A	F	D	N	R	L	G	L	C	K	V	E	S	A	R	Q	V	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	A	Y	I	I	P	R	P	G	G	E	V	I	C	G	G	T	Y	G	V	G	D	W	D	L	S	V	N	P	E	T	V	Q	R	I	L	K	H	C	L	R	L	D	P	T	I	S	S	D	G	T	I	E	G	I	E	V	L	R	H	N	V	G	L	R	P	A	R	R	G	G	P	R	V	E	A	E	R	I
Template Known Secondary structure										T	T	T											T					S																		G	G	G	S	S	S	S	S	G	G	G															T	T	S
Template Predicted Secondary structure
Template SS confidence
		1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.
				271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure		.	.																										.	.	.	.	.
Query SS confidence		.	.																										.	.	.	.	.
Query Sequence		.	.	L	T	G	R	Y	A	R	Q	F	A	S	H	R	L	A	L	V	G	D	A	A	H	T	I	H	.	.	.	.	.	P	L	A	G	Q	G	V	N	L	G	F	M	D	A	A	E	L	I	A	E	L	K	R	L	H	R	Q
Query Conservation		.	.																										.	.	.	.	.
Alig confidence		.	.																										.	.	.	.	.
Template Conservation
Template Sequence		V	L	P	L	D	R	T	K	S	P	L	S	L	G	R	G	S	A	R	A	A	K	E	K	E	V	T	L	V	H	A	Y	G	F	S	S	A	G	Y	Q	Q	S	W	G	A	A	E	D	V	A	Q	L	V	D	E	A	F	Q	R
Template Known Secondary structure				S			T	T	T		T	T		S	S		S					S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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