Return to main results Retrieve Phyre Job Id

Job DescriptionP60716
Confidence53.68%DateThu Jan 5 12:07:02 GMT 2012
Rank209Aligned Residues122
% Identity15%Templated2j13a1
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase
Resolution1.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140........ .150.........160.........170.........180.........190...
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Query Sequence  KLAQTIADMALRYVVITSVDRDDLRDGGAQH. . . . FADCITAIREKSPQIKIETLVPDFRGRMDRALDILTATPPDVFNH
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Template Sequence  DLLLRMKDEG. HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIKKVTGQKEVKYVRPPRGVFSERTLALTKEMGYYNVFW
Template Known Secondary structure  TT.


SS


GGGS


S




GGG
TT


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   88.90....... ..100.........110.........120.........130.........140.........150.........160......
 
   194.....200.........210.........220.........230...... ...240.........250.........260.........
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Query Sequence  NLENVPRIYRQVRPGADYNWSLKLLERFKEAHPEIPTKSGLMV. . . . GLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPS
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Template Sequence  SLAFLD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . WIHPGSILLLHAISKDNAEALAKIIDDLREKGYHFKSLDDLVKSN
Template Known Secondary structure  S


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TTB


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   167..170.. .......180.........190.........200.........210.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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