Job Description P60716 Confidence 31.13% Date Thu Jan 5 12:07:02 GMT 2012 Rank 344 Aligned Residues 120 % Identity 10% Template d1uasa2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	A	N	E	P	V	K	L	A	Q	T	I	A	D	.	.	.	.	.	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	R	D	G	G	A	Q	H	.	.	.	.	.	.	.	.	.	.	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	R
Query Conservation																	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																																																																																	.
Template Sequence		I	N	E	Q	I	I	R	E	T	A	D	A	L	V	N	T	G	L	A	K	L	G	Y	Q	Y	V	N	I	D	D	C	W	A	E	Y	S	R	D	S	Q	G	N	F	V	P	N	R	Q	T	F	P	S	G	I	K	A	L	A	D	Y	V	H	A	K	G	L	K	L	G	I	Y	S	D	A	G	S	Q	T	C	.
Template Known Secondary structure																	T	S					T								S	S		B		S	S			T	T	S				B		T	T	T		T	T												T	T									S	S	S	B		T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		M	D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	.	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R
Query Conservation																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	K	M	P	G	S	L	D	H	E	E	Q	D	V	K	T	F	A	S	W	G	V	D	.	Y	L	K	Y	D	N	C	N	D	A	G	R	S	V	M	E	R	Y	T	R	M	S	N	A	M	K	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	S	B			T	T													T			.										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
																														102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		255	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	V	T	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	K	N	I	F
Template Known Secondary structure				T	T	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions