Return to main results Retrieve Phyre Job Id

Job DescriptionP60716
Confidence81.92%DateThu Jan 5 12:07:02 GMT 2012
Rank103Aligned Residues161
% Identity14%Templated1thfd_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Histidine biosynthesis enzymes
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150.........160.........170.........180.........190....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  EPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKSPQIKIETLVPDFRGRMDRALDILTATPPDVFNHN
Query Conservation 
   

      
 
 



     

 
         
  

       
  
         
 
  
  

       
Alig confidence 























...

















.










...



















Template Conservation 

   
      

  
 
 


 ...   
       
  
   .  


    

...   
        

  
 
 
Template Sequence  DPVELGKFYSEIGIDELVFLDITA. . . SVEKRKTMLELVEKVAEQ. IDIPFTVGGGI. . . HDFETASELILRGADKVSIN
Template Known Secondary structure 
TT

SS
...SSSTT.

S
SS
...
STT
SS
Template Predicted Secondary structure 







...




.





...




Template SS confidence 















































































   31........40.........50.... .....60.........70.. .......80... ......90.........100...
 
   195.. ..200.........210.. .......220.........230...
Predicted Secondary structure 


..





............................




...........
Query SS confidence 


. .














. . . . . . . . . . . . . . . . . . . . . . . . . . . .




















. . . . . . . . . . .
Query Sequence  LEN. . VPRIYRQVRPGADYN. . . . . . . . . . . . . . . . . . . . . . . . . . . . WSLKLLERFKEAHPEIPTKSG. . . . . . . . . . .
Query Conservation   

..   
   

      ............................  
  
  

  

 
 
 
 ...........
Alig confidence 


..














............................




















...........
Template Conservation                   
   
                             
        
   
    
   
      
Template Sequence  TAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYD
Template Known Secondary structure 
T
GGGTTTTTTTT
STTTTTS
S


Template Predicted Secondary structure 








































Template SS confidence 















































































   104.....110.........120.........130.........140.........150.........160.........170.........180...
 
   234..... 240.........250.........260.........270.........280.........290.......
Predicted Secondary structure  ..............





.

























Query SS confidence  . . . . . . . . . . . . . .





.

























































Query Sequence  . . . . . . . . . . . . . . LMVGLG. ETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQRYVSPDEFDEMKAEALAMGFT
Query Conservation  ..............





.





 


  


 


 






 
      
   
 

 
      
   
  
Alig confidence  ..............





.











....













...........
















Template Conservation     
  
       

  


 
 


      ....


 






  
...........                 
Template Sequence  TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLA. . . . GADAALAASVFHFR. . . . . . . . . . . EIDVRELKEYLKKHGVN
Template Known Secondary structure  GGG

S
S


ST....T
SSTT...........
S
TT

Template Predicted Secondary structure 










....




...........






Template SS confidence 














































































   184.....190.........200.........210...... ...220.........230 .........240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions