 |
Job Description | P60716 | Confidence | 28.86% | Date | Thu Jan 5 12:07:02 GMT 2012 |
Rank | 365 | Aligned Residues | 61 |
% Identity | 23% | Template | d1m7xa3 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 2.30 |
|
 |
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | |
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | G | E | T | N | E | E | I | I | E | V | . |
M | R | D | L | R | R | H | G | V | T | M | L | T | L | G | Q | Y | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | P | S | R | H | H | L | P | V | Q | R | Y | V | S | P | D | E | F | D | E | M | K | A | E | A | L | A | M | G | F | T |
Query Conservation |   |
|
|
|
|
|
|
|
|
|   |
|
| . |
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |
Template Sequence |   |
N | F | W | L | S | Y | R | E | L | A | D | Q | L | V | P | Y | A | K | W | M | G | F | T | H | L | E | L | L | P | I | N | E | H | P | F | D | G | S | W | G | Y | Q | P | T | G | L | Y | A | P | T | R | R | F | G | T | R | D | D | F | R | Y | F | I | D | A | A | H | A | A | G | L | N |
Template Known Secondary structure |   |
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S |
|
|  |  |
| S |
| G | G | G | T | T | S | S |
| S |  |  |  |  |  |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|