Return to main results Retrieve Phyre Job Id

Job DescriptionP60716
Confidence39.05%DateThu Jan 5 12:07:02 GMT 2012
Rank289Aligned Residues57
% Identity21%Templated1m53a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260.... .....270.. .......280.........290.......
Predicted Secondary structure 





.







........










Query SS confidence 























.







. . . . . . . .
























Query Sequence  TNEEIIEVMRDLRRHGVTMLTLGQ. YLQPSRHH. . . . . . . . LPVQRYVSPDEFDEMKAEALAMGFT
Query Conservation 




 


  


 


 




.

 
    ........  
   
 

 
      
   
  
Alig confidence 























.







........
























Template Conservation 
  

  




  


  
 
 

        

   
   

   

  


 

   
  

 
Template Sequence  DIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMR
Template Known Secondary structure 
TT







TTTTSS
S
GGG

TT
Template Predicted Secondary structure 


































Template SS confidence 

































































   71........80.........90.........100.........110.........120.........130......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions