Job Description P60716 Confidence 42.57% Date Thu Jan 5 12:07:02 GMT 2012 Rank 264 Aligned Residues 151 % Identity 17% Template d1j93a_ SCOP info TIM beta/alpha-barrel UROD/MetE-like Uroporphyrinogen decarboxylase, UROD Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.																															.
Query SS confidence																						.	.	.	.	.																															.
Query Sequence		N	E	P	V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	.	.	.	.	.	T	S	V	D	R	D	D	L	R	D	G	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	.	K	I	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P
Query Conservation																						.	.	.	.	.																															.
Alig confidence																						.	.	.	.	.																															.							.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		T	S	M	A	K	Y	I	R	Y	Q	A	D	S	G	A	Q	A	V	Q	I	F	D	S	W	A	T	E	L	S	P	V	D	F	E	E	F	S	L	P	Y	L	K	Q	I	V	D	S	V	K	L	T	H	P	N	L	P	L	I	L	Y	A	S	.	.	.	.	.	G	S	G	G	L	L	E	R	L	P	L	T	G
Template Known Secondary structure														T	T		S							G	G	G	G	G	S									T															S	T	T								S	.	.	.	.	.	S		T	T	T	G	G	G	G	G	G	G
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.						.	.	.	.	.	.	260	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.
Predicted Secondary structure																																																					.																					.	.	.
Query SS confidence																																																					.																					.	.	.
Query Sequence		P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	.	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	.	.	.	M	L	T	L	G
Query Conservation																																																					.																					.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.																					.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	V	V	S	L	D	W	T	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	D	G	R	R	R	L	G	P	N	V	A	I	Q	G	N	V	D	P	G	V	L	F	G	S	K	E	F	I	T	N	R	I	N	D	T	V	K	K	A	G	K	G	K	H	I	L	N	L	G
Template Known Secondary structure			S						T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T		S	S	S						B		G	G	G	G	G	S																		S	S	S			B		B	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.																			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	L	Q	P	S	R	H	H	L	P	V	Q	R	Y	V	S	P	D	E	F	D	E	M	K	A	E	A	L	A	M	G	F
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		H	G	I	K	V	G	.	.	.	.	.	.	.	.	.	T	P	E	E	N	F	A	H	F	F	E	I	A	K	G	L	R	Y
Template Known Secondary structure		S				T	T	.	.	.	.	.	.	.	.	.															T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.										.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions