Phyre 2 alignment of P60716 with c3nzeB

Job Description P60716
Confidence 33.08% Date Thu Jan 5 12:07:02 GMT 2012

Rank 325 Aligned Residues 70

% Identity 9% Template c3nzeB_

PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator, sugar-binding family; PDBTitle: the crystal structure of a domain of a possible sugar-binding2 transcriptional regulator from arthrobacter aurescens tc1.

Resolution 1.70 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	M	L	T	L	G	Q	Y	L	Q	P	S	R	H	H	L	P	V	Q	R	Y	V	S	P	D	E	F	D	E	M	K	A	.	.	.	E	A	L	A	M	G	F	T	H	A	A	C	G	P	F	V	R	S	S	Y	H
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence	N	E	R	S	V	Q	R	I	L	D	L	Q	A	R	X	S	I	A	I	F	G	V	G	S	V	D	S	D	Y	P	S	H	V	Y	A	G	G	Y	L	D	E	H	D	L	T	X	L	A	A	D	D	V	V	G	D	V	A	T	V	F	F	R	S	D	G	S	S	D	G	I	T	L	N
Template Known Secondary structure	T												T	T		S											S	S	S	T	T	S			T	T	S	S	S		G	G	G							T	T						T	T					T	T	S			T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
	189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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