Job Description P60716 Confidence 96.50% Date Thu Jan 5 12:07:02 GMT 2012 Rank 25 Aligned Residues 154 % Identity 12% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.											.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																														.	.																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.																													.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	.	.	R	M	D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	.	.	.	.	.	.	.	.	.	.	R	Q	V	R	P	G	A	D	Y	N	W	S
Query Conservation																														.	.																													.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	R	Y	Q	A	L	F	Q	R	L	S	A	A	Q	Q	G	A	F	V	P	F	V	T	I	G	D	P	N	P	E	Q	S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	P	D	I	C
Template Known Secondary structure															T	B									T	T	S	S															T	T		S	S										T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.											270	.	.	.	.	.	.	.	.	.	280	.		.
Predicted Secondary structure																										.																																.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																										.																																.	.	.	.	.	.	.	.	.	.													.
Query Sequence		L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	.	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	M	L	T	L	G	Q	Y	L	Q	P	S	.	.	.	.	.	.	.	.	.	.	R	H	H	L	P	V	Q	R	Y	V	S	P	.	D
Query Conservation																										.																																.	.	.	.	.	.	.	.	.	.													.
Alig confidence																		.	.							.																									.							.	.	.	.	.	.	.	.	.	.													.
Template Conservation																		.	.																																.
Template Sequence		F	E	L	I	A	Q	I	R	A	R	N	P	E	T	P	I	.	.	G	L	L	M	Y	A	N	L	V	Y	A	R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	.	A	D	V	P	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P	P	T	A
Template Known Secondary structure													T	T	S			.	.											T	T													T							.	T	T	S		G	G	G											T	T									T	T
Template Predicted Secondary structure																		.	.																																.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		E	F	D	E	M	K	A	E	A	L	.	A	M	G	F	T	H	A	A	C	G	P
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		S	D	E	T	L	R	A	V	A	Q	L	G	K	G	Y	T	Y	L	L	S	R	A
Template Known Secondary structure			S												S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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