Job Description P60716 Confidence 30.62% Date Thu Jan 5 12:07:02 GMT 2012 Rank 349 Aligned Residues 169 % Identity 9% Template c3l23A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of sugar phosphate isomerase/epimerase2 (yp_001303399.1) from parabacteroides distasonis atcc 8503 at 1.70 a3 resolution Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.														.	170	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	E	P	V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	R	D	G	.	.	.	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	D	F	R	G	R	M
Query Conservation																																		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	E	Y	W	K	A	T	A	A	D	H	A	K	L	G	C	K	Y	L	I	Q	P	X	X	P	T	I	T	T	H	D	E	A	K	L	V	C	D	I	F	N	Q	A	S	D	V	I	K	A	E	G	I	A	T	G	F	G	Y	H	N	H	N	X	E	F	N	R	V	A	T	K	E	Q	Q	F	X	K	V	G	D
Template Known Secondary structure															T	T		S						S						S																					T	T		T	T								S	G	G	G	S					T	T	T						S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G
Query Conservation
Alig confidence																														.	.	.	.	.	.	.																					.
Template Conservation																														.	.	.	.	.	.	.																					.
Template Sequence		Q	I	Y	D	L	X	L	K	D	T	D	P	S	K	V	Y	F	E	X	D	V	Y	W	T	V	X	G	Q	.	.	.	.	.	.	.	N	D	P	V	E	Y	X	Q	K	H	P	D	R	I	K	V	L	H	I	K	.	D	R	A	V	F	G	Q	S	G	X	X	N	F	E	X	I	F	K	Q	X	Y	A	N	G
Template Known Secondary structure											S		T	T	T													T	T	.	.	.	.	.	.	.											T	T	T								.		S	S	S	T	T	S	S	S															T
Template Predicted Secondary structure																														.	.	.	.	.	.	.																					.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.								.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	M	L	T	L	G	Q	Y	L	Q	P	S	R	H	H	L	P	V	Q	R	Y	V	S	P	D	E	F	D	E	M	K	A	E	A	L	A	M	G	F
Query Conservation
Alig confidence																		.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		I	K	D	Y	F	V	E	L	E	Q	X	P	D	G	R	T	.	.	.	.	.	.	.	Q	F	A	G	V	K	D	C	A	D	Y	L	I	K	A	P	F
Template Known Secondary structure													T	T	S			.	.	.	.	.	.	.																T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.								.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions