Job Description P60716 Confidence 20.93% Date Thu Jan 5 12:07:02 GMT 2012 Rank 448 Aligned Residues 136 % Identity 13% Template c3js3C_ PDB info PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.										.	.	.	.
Predicted Secondary structure																																					.	.																															.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.																															.	.	.	.	.	.	.	.	.
Query Sequence		A	P	D	A	N	E	P	V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	R	D	G	.	.	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	.	.	.	.	.	.	.	.	.	R	M	D	R
Query Conservation																																					.	.																															.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.								.	.																															.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		G	K	N	K	K	D	I	I	K	E	A	K	E	L	K	D	A	C	L	D	I	I	E	W	.	.	.	.	R	V	D	F	F	E	N	V	E	N	I	K	E	V	K	E	V	L	Y	E	L	R	S	Y	I	H	D	I	P	L	L	F	T	F	R	S	V	V	E	G	G	E	K	L	I	S	R	D	Y	Y	T	T
Template Known Secondary structure			S	S											T	T	T	S	S		S					.	.	.	.		G	G	G		T	T	T	T																	T	T	S									G	G	G	T		S
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		179	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	L	D	I	L	T	A	T	P	.	P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V
Query Conservation											.
Alig confidence											.																	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		L	N	K	E	I	S	N	T	G	L	V	D	L	I	D	V	E	L	F	M	G	D	E	V	I	D	.	.	.	.	.	.	.	.	.	.	.	.	E	V	V	N	F	A	H	K	K	E	V	K	V	I	I	S	N	H	D	F	N	K	T	P	.	K	K	E	E	I	V	S	R	L	C	R	M	Q	E	L	G	A
Template Known Secondary structure									T	S			S						G	G	G							.	.	.	.	.	.	.	.	.	.	.	.									T	T										S	S				.															T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.													.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		258	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	L	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	P	K	I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions