Job Description P60716 Confidence 53.74% Date Thu Jan 5 12:07:02 GMT 2012 Rank 208 Aligned Residues 156 % Identity 12% Template c3cyvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism Resolution 2.80 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		N	E	P	V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	T	S	V	.	.	.	.	.	D	R	D	D	L	R	D	G	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	P
Query Conservation																									.	.	.	.	.
Alig confidence																									.	.	.	.	.																																		.	.
Template Conservation																																																															.	.
Template Sequence		K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	.	.	F	T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C
Template Known Secondary structure														T	T		S							T	T	G	G	G	S									T											S		S			T	T								.	.			T	T	T	T	T	T						T	T	S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.
Predicted Secondary structure																																																				.																					.	.	.	.
Query SS confidence																																																				.																					.	.	.	.
Query Sequence		D	V	F	N	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	.	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	.	.	.	.	M	L	T	L	G
Query Conservation																																																				.																					.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																					.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G
Template Known Secondary structure		S						T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	S						B		G	G	G	G	G	S														T	T	T	T	T	S	S				B		B	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.																			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	L	Q	P	S	R	H	H	L	P	V	Q	R	Y	V	S	P	D	E	F	D	E	M	K	A	E	A	L	A	M	G	F	T	H
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		H	G	I	H	Q	D	.	.	.	.	.	.	.	.	.	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S	E	Q	Y
Template Known Secondary structure		S				T	T	.	.	.	.	.	.	.	.	.	S																	G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.										.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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