Job Description P60716 Confidence 95.46% Date Thu Jan 5 12:07:02 GMT 2012 Rank 34 Aligned Residues 148 % Identity 14% Template c3chvA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution Resolution 1.45 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	D	A	N	E	P	V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	R	D	G	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	P	D
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		P	I	T	V	S	E	Q	V	E	S	T	Q	E	A	F	E	A	G	A	A	I	A	H	C	H	V	R	N	D	D	G	T	P	S	S	D	P	D	R	F	A	R	L	T	E	G	L	H	T	H	C	P	G	X	I	V	Q	F	S	T	G	.	G	R	S	G	A	G	Q	A	R	G	G	X	L	P	L	K	P	D
Template Known Secondary structure				S															T											T	T	S																				S	T	T									.	T	T	T			G	G	G	G	G	T	T	G	G	G			S
Template Predicted Secondary structure																																																															.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		190	.	.	.	.	.															.	.	.	.	200	.	.	.	.	.	.	.	.									.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		V	F	N	H	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	V	P	R	I	Y	R	Q	V	R	P	G	.	.	.	.	.	.	.	.	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A	H	P	E	.	.	.	.	I	P	T	K	S	G	L	M	V	G	L	G	E	T	N	E
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		X	A	S	L	S	V	G	S	N	N	F	P	S	R	V	Y	E	N	P	P	D	L	V	D	W	L	A	A	Q	X	R	S	Y	R	V	T	P	E	I	E	A	F	D	L	S	H	I	L	R	A	I	D	X	H	G	R	G	L	L	Y	G	K	L	Y	V	Q	F	V	X	G	V	K	N	A	X	P	A	D	R	E
Template Known Secondary structure								S					S	S	S																				T								S	S													T	T		S		S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	I	E	V	M	R	D	L	R	R	H	G	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	D	F	Y	V	R	X	X	R	T	R	A	P	Q
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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