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Job DescriptionP60716
Confidence50.67%DateThu Jan 5 12:07:02 GMT 2012
Rank216Aligned Residues181
% Identity12%Templatec2vwtA_
PDB info PDB header:lyaseChain: A: PDB Molecule:yfau, 2-keto-3-deoxy sugar aldolase; PDBTitle: crystal structure of yfau, a metal ion dependent class ii2 aldolase from escherichia coli k12 - mg-pyruvate product3 complex
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180......... 190......
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Query Sequence  KLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKSPQIKIETLVPDFRGRMDRALDILTATPPD. VFNHNLE
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Template Sequence  YMAEIAATSGYDWLLIDGEH. . . . APNTIQDLYHQLQAVAPYASQPVIRPVEGS. . . . . KPLIKQVLDIGAQTLLIPMVD
Template Known Secondary structure  TT

STTT....S


TTSSS
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   30.........40......... 50.........60.........70......... 80.........90.........100
 
   197..200..... ....210.........220.........230.........240.........250.........
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Query Sequence  NVPRIYRQV. . . . . . . . . . . . . . . . . RPGADYNWSLKLLERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTM
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Template Sequence  TAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSL. . . . . . . . CLLVQVESKTALDNLDEILDVEGIDG
Template Known Secondary structure  SS
TTT



S
GGGSGGGGGGTSTT
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   101........110.........120.........130.........140...... ...150.........160.........170..
 
   260..... ....270.........280.........290.........300.........310.......
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Query Sequence  LTLGQY. LQPSRHHLPVQRYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKG
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Template Sequence  VFIGPADLSASLGY. . PDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAW
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   173......180...... ...190.........200.........210.........220.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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