Job Description P60716 Confidence 46.18% Date Thu Jan 5 12:07:02 GMT 2012 Rank 236 Aligned Residues 161 % Identity 16% Template c2ragB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dipeptidase; PDBTitle: crystal structure of aminohydrolase from caulobacter crescentus Resolution 2.00 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.											.	.	.	.	.	150
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		N	H	G	T	A	T	F	M	I	L	G	A	I	C	T	R	R	C	P	F	C	D	V	A	H	G	R	P	V	A	P	D	A	N	E	P	V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	R	D	G	.	.	.	.	.	.	.	.	.	.	G	A	Q	H	F	A
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	K	K	F	A	F	V	S	M	E	N	S	W	P	V	G	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	L	V	E	T	F	Y	K	E	G	L	R	M	A	G	P	V	H	F	R	N	N	Q	L	A	D	S	S	T	D	P	K	G	K	I	W	N	G	Y	S	P	L	G
Template Known Secondary structure		T	T												G	G	G	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									T	T						S			S	S			S	S	B		B	S	S		T	T			S	S	S	S	B
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
			151	.	.	.	.	.	.	.	.	160	.	.	.	.	.																											.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		.	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	.	.	.	.	P	D	V	F	N	H	N	L	E	N	V	P
Query Conservation		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		L	R	W	L	A	E	A	N	R	L	G	I	V	I	D	V	S	H	A	S	D	D	V	V	D	Q	S	V	A	L	S	K	A	P	I	I	A	S	H	S	G	P	K	A	V	Y	D	H	P	R	N	L	D	D	A	R	L	K	K	I	A	D	A	G	G	A	I	C	I	N	S	I	Y	L	T	D	T	T	P	S
Template Known Secondary structure												T				B		T	T	B													S	S										T	T	T	S			T	T													T	T							S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		200	.	.	.	.	.																								.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.			.	.	.	.		.		240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.									.	.					.		.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.									.	.					.		.
Query Sequence		R	I	Y	R	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	G	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A	H	P	.	.	E	I	P	T	K	S	G	L	.	.	M	V	G	L	.	G	.	E	T	N	E	E	I	I	E	V	M	R
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.									.	.					.		.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.									.	.					.		.
Template Conservation
Template Sequence		P	E	A	P	D	M	K	T	A	T	P	E	A	V	K	A	Y	A	D	K	R	A	A	I	D	K	A	H	P	A	A	R	G	D	F	D	L	Y	M	K	S	M	L	H	V	L	K	V	A	G	P	K	G	V	C	V	G	A	D	W	D	G	G	G	G	M	D	G	F	E	D	I	T	D	L	P	K	I	T	A
Template Known Secondary structure							T	T	T	S																			S						B																	T	T	S							T	T	T	T			B	B	T	B	S	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		251	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	R	R	H	G	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	K	A	E	G	Y	S
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions