Job Description P60716 Confidence 47.03% Date Thu Jan 5 12:07:02 GMT 2012 Rank 231 Aligned Residues 134 % Identity 13% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	.	.	.	.	.	G	A	D	Y	N	W	S	L	K	L	L	E	R	F
Query Conservation																																																															.	.	.	.	.
Alig confidence																.																						.	.																								.	.	.	.	.
Template Conservation																.																						.	.
Template Sequence		E	N	L	L	N	L	F	P	K	L	A	L	E	K	.	N	F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	I	A	F	G	L	.	.	Q	D	E	V	D	A	I	I	S	R	G	A	T	S	D	Y	I	K	K	S	V	S	I	P	S	I	S	I	K	V	T	R	F	D	T	M	R	A	V	Y	N	A
Template Known Secondary structure																.	T																					.	.	T	T	T		S														T	T		S	S
Template Predicted Secondary structure																.																						.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	M	L	T	L	G	Q	Y	L	Q	P	S	R	H	H	L	P	V	Q	R	Y	V	S	P	D	E	F	D	E	M	K	A	E	A	L	A	M	G	F	T	H	A	A	C
Query Conservation
Alig confidence											.	.	.	.	.																		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	F	G	N	E	L	A	L	.	.	.	.	.	I	A	Y	K	H	S	I	V	D	K	H	E	I	E	A	M	L	.	G	V	K	I	K	E	F	L	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	D	E	I	T	T	L	I	S	K	V	K	T	E	N	I	K	I	V	V	S
Template Known Secondary structure		G	G	G		S					.	.	.	.	.				S	S		S	S										.	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G											T	T
Template Predicted Secondary structure											.	.	.	.	.																		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.																	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		302	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	T	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions