Job Description P60716 Confidence 88.73% Date Thu Jan 5 12:07:02 GMT 2012 Rank 76 Aligned Residues 139 % Identity 12% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																																														.	.	.	.	.
Query SS confidence																				.																																														.	.	.	.	.
Query Sequence		G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	.	I	K	I	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	.	.	.	.	.	G	A	D	Y	N	W	S	L	K	L	L
Query Conservation																				.																																														.	.	.	.	.
Alig confidence																				.																																														.	.	.	.	.
Template Conservation
Template Sequence		S	V	T	R	L	F	E	L	F	R	D	I	S	L	E	F	D	H	L	A	N	I	T	P	I	Q	L	G	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	N	G	A	Y	L	K	S	R	L	S	V	P	V	I	L	I	K	P	S	G	Y	D	V	L	Q	F	L
Template Known Secondary structure			S	S	T										T	T	T	T	T	T	S																					T	T				S														T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	M	L	T	L	G	Q	Y	L	Q	P	S	R	H	H	L	P	V	Q	R	Y	V	S	P	D	E	F	D	E	M	K	A	E	A	L	A	M	G	F	T	H
Query Conservation
Alig confidence														.	.	.	.	.										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	A	G	K	L	T	S	S	I	G	V	.	.	.	.	.	V	T	Y	Q	E	T	I	P	A	.	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	R	S	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	A
Template Known Secondary structure				T	T		T	T	S					.	.	.	.	.				S	S					.									T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S														T	T
Template Predicted Secondary structure														.	.	.	.	.										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		299	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	C	G	P	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	G	A	G	L	I
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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