Job Description P60716 Confidence 31.89% Date Thu Jan 5 12:07:02 GMT 2012 Rank 335 Aligned Residues 132 % Identity 14% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A
Query Conservation
Alig confidence																.													.	.	.																												.	.	.	.	.	.
Template Conservation																.													.	.	.																												.	.	.	.	.	.
Template Sequence		T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	.	E	N	D	F	L	I	D	V	S	I	G	I	.	.	.	S	S	L	A	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	T	E	P	W	K	E	R	.	.	.	.	.	.	R	T	N	Y	S	L	R	E	E	V	L	R	L	K	D	K	T
Template Known Secondary structure			T	T	T					T	G	G	G			.	T	T								S	S	S	.	.	.													T						S	S								.	.	.	.	.	.												T	T	T	T	T
Template Predicted Secondary structure																.													.	.	.																												.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.																			.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																												.														.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																												.														.	.	.
Query Sequence		H	P	E	I	P	T	K	S	G	L	M	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	.	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	M	L	T	L	G	Q	Y	.	L	Q	P	S	R	H	H	L	P	V	Q	R	Y	.	.	.	V	S	P
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																												.														.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																												.														.	.	.
Template Conservation
Template Sequence		Q	K	T	A	L	I	T	H	G	A	N	P	G	L	V	S	H	F	I	K	E	A	L	L	N	I	A	K	D	N	G	L	T	I	N	R	P	K	N	A	A	E	W	A	N	L	A	X	T	L	G	I	K	V	I	H	V	A	E	Q	D	S	Q	V	T	Y	P	P	K	S	P	G	E	F	V	N	T	W	S	A
Template Known Secondary structure			S					S		B	T	T	T	B																T	T	T								S											T	T															S	S				T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		282	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	F	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	G	L	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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