Job Description P60716 Confidence 22.41% Date Thu Jan 5 12:07:02 GMT 2012 Rank 432 Aligned Residues 182 % Identity 15% Template c2hnhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna polymerase iii alpha subunit; PDBTitle: crystal structure of the catalytic alpha subunit of e. coli2 replicative dna polymerase iii Resolution 2.30 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	R	D	G	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	H	N	L
Query Conservation
Alig confidence																					.	.	.	.																			.																					.	.	.	.	.	.	.
Template Conservation																					.	.	.	.																			.																					.	.	.	.	.	.	.
Template Sequence		T	A	P	L	V	K	K	A	A	A	L	G	M	P	A	L	A	I	T	.	.	.	.	D	F	T	N	L	C	G	L	V	K	F	Y	G	A	G	H	G	A	.	G	I	K	P	I	V	G	A	D	F	N	V	Q	C	D	L	L	G	D	E	.	.	.	.	.	.	.	L	T	H	L	T	V	L	A	A	N	N
Template Known Secondary structure												T	T		S						.	.	.	.		B	T			T	T												.	T														T	T	T	T	T		.	.	.	.	.	.	.										S
Template Predicted Secondary structure																					.	.	.	.																			.																					.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.
		196	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																																	.			.	.	.	.	.
Query SS confidence													.	.	.	.																																	.			.	.	.	.	.
Query Sequence		E	N	V	P	R	I	Y	R	Q	V	R	.	.	.	.	P	G	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	.	G	E	.	.	.	.	.	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	M	L	T	L	G	Q	Y
Query Conservation													.	.	.	.																																	.			.	.	.	.	.
Alig confidence													.	.	.	.																																	.			.	.	.	.	.																					.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		T	G	Y	Q	N	L	T	L	L	I	S	K	A	Y	Q	R	G	Y	G	A	A	G	P	I	I	D	R	D	W	L	I	E	L	N	E	G	L	I	L	L	S	G	G	R	M	G	D	V	G	R	S	L	L	R	G	N	S	A	L	V	D	E	C	V	A	F	Y	E	E	H	F	P	D	R	Y	.	.	.	.	F
Template Known Secondary structure																					T	T						T	T					S		T	T							G	G	G	S									T																	T	T	S		.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	P	S	R	H	H	L	P	V	Q	R	Y	V	S	P	D	E	F	D	E	M	K	A	E	A	L	A	M	G	F	T	H	A	A	C	G	P	F	V	R	S	S	Y	H	A	D	L	Q	A	K	G	M	E	V
Query Conservation
Alig confidence													.	.	.	.																								.	.	.
Template Conservation													.	.	.	.																								.	.	.
Template Sequence		L	E	L	I	R	T	G	R	P	D	E	.	.	.	.	E	S	Y	L	H	A	A	V	E	L	A	E	A	R	G	L	P	V	V	A	T	N	D	.	.	.	V	R	F	I	D	S	S	D	F	D	A	H	E	I
Template Known Secondary structure							S	S		T	T		.	.	.	.															T									.	.	.	B		B	S	S	G	G	G
Template Predicted Secondary structure													.	.	.	.																								.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions