Job Description P60716 Confidence 95.93% Date Thu Jan 5 12:07:02 GMT 2012 Rank 29 Aligned Residues 136 % Identity 19% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.											.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																													.	.																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.																													.	.	.	.	.	.	.	.	.	.
Query Sequence		H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	.	.	R	M	D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	.	.	.	.	.	.	.	.	.	.	R	Q	V	R	P	G	A	D	Y	N	W	S	L
Query Conservation																													.	.																													.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	S	D	K	F	T	E	L	K	E	K	R	E	K	A	L	V	S	Y	L	M	V	G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L
Template Known Secondary structure														T	B									T	T	S	S															T	T		S									S			T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	.	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	M	L	T	L	G	Q	Y	L	Q	P	S	R	H	H	L	P	V	Q	R	Y	V	S	P	D	E	F	D	E	M	K	A	E	A	L	A	M
Query Conservation																									.
Alig confidence																	.	.							.																									.				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																																.				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	S	E	T	L	R	K	E	F	P	D	I	P	F	.	.	L	L	M	T	Y	Y	N	P	I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	.	P	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y
Template Known Secondary structure												T	T	S			.	.																								T	T							.	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.															T
Template Predicted Secondary structure																	.	.																																.				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.														.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		295	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	H	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	S	F	V
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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