Job Description P60716 Confidence 21.28% Date Thu Jan 5 12:07:02 GMT 2012 Rank 441 Aligned Residues 214 % Identity 16% Template c2bs9B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-xylosidase; PDBTitle: native crystal structure of a gh39 beta-xylosidase xynb12 from geobacillus stearothermophilus Resolution 2.2 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.														.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																								.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	A	H	G	R	P	V	A	P	D	A	N	E	P	V	K	L	A	Q	T	I	.	A	D	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	G	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T
Query Conservation																								.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	V	G	T	G	R	L	G	L	A	L	Q	K	E	Y	L	D	H	L	K	L	V	Q	E	K	I	G	F	R	Y	I	R	G	H	G	L	L	S	D	D	V	G	I	Y	R	E	V	E	I	D	G	E	M	K	P	F	Y	N	F	T	Y	I	D	R	I	V	D	S	Y	L	A	L	N	I	R	P	F	I	E	F
Template Known Secondary structure						S		G	G	G	G	G	S														S			S					S		T	T	S	T	T	T									T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
																							168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	.	.	.	.	.	.	.	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	S	L	K	L	L	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	M	P	K	A	L	A	S	G	D	Q	T	V	F	Y	W	K	G	N	V	T	P	P	K	D	Y	N	K	W	R	D	L	I	V	A	V	V	S	H	F	I	E	R	Y	G	I	E	E	V	R	T	W	L	F	E	V	W	N	E	P	N	L	V	N	F	W	K	D	A	N	K	Q	E	Y	F	K	L	Y	E
Template Known Secondary structure				B		G	G	G	B	S	S					T	T	T	T				S		B	S																										T	T						S	S		T	T	S	T	T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.									.	.	.
Predicted Secondary structure		.	.	.	.																				.																			.	.																										.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																				.																			.	.																										.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	.	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	.	.	V	T	M	L	T	L	G	Q	Y	L	Q	P	S	R	H	H	L	P	V	Q	R	Y	V	S	P	.	.	.	.	.	.	.	.	D	E	F
Query Conservation		.	.	.	.																				.																			.	.																										.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.														.	.	.				.																			.	.																										.	.	.	.	.	.	.	.
Template Conservation																			.	.	.
Template Sequence		V	T	A	R	A	V	K	S	V	D	P	H	L	Q	V	G	G	.	.	.	P	A	I	C	G	G	S	D	E	W	I	T	D	F	L	H	F	C	A	E	R	R	V	P	V	D	F	V	S	R	H	A	Y	T	S	K	A	P	H	K	K	T	F	E	Y	Y	Y	Q	E	L	E	P	P	E	D	M	L	E	Q	F
Template Known Secondary structure												T	T						.	.	.					S	S		T													T	T													B		S		S				S	S						B
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.													300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	M	K	A	E	A	L	A	M	G	F	T	H	A	.	.	.	.	.	.	.	.	.	.	.	.	A	C	G	P	F	V	R	S	S	Y	H	A	D	L	Q	A	K	G	M
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	V	R	A	L	I	R	Q	S	P	F	P	H	L	P	L	H	I	T	E	Y	N	T	S	Y	S	P	I	N	P	V	H	D	T	A	L	N	A	A	Y	I	A	R	I	L
Template Known Secondary structure											S	S		T	T										S		S		T	T		G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions