Job Description P60716 Confidence 95.61% Date Thu Jan 5 12:07:02 GMT 2012 Rank 33 Aligned Residues 157 % Identity 16% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	P	F	C	D	V	A	H	G	R	P	V	A	P	D	A	N	E	P	V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	R	D	G	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	R	M
Query Conservation
Alig confidence																																																					.	.																							.	.	.	.	.
Template Conservation																																																					.	.																							.	.	.	.	.
Template Sequence		E	V	G	P	R	D	G	L	Q	N	E	P	V	W	I	A	T	E	D	K	I	T	W	I	N	Q	L	S	R	T	G	L	S	Y	I	E	I	T	S	F	V	H	P	K	W	I	P	A	L	R	D	.	.	A	I	D	V	A	K	G	I	D	R	E	K	G	V	T	Y	A	A	L	V	P	N	.	.	.	.	.
Template Known Secondary structure								T	G	G	G	S	S	S																T	T	T		S								S		T	T	T		G	G	G	T	T	.	.								S				T	T									S	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.																							.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.							240	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.																												.	.	.	.	.	.
Query SS confidence																																						.	.	.																												.	.	.	.	.	.
Query Sequence		D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	.	.	.	W	S	L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	G	.	.	.	.	.	.	E	T	N	E	E	I	I	E
Query Conservation																																						.	.	.																												.	.	.	.	.	.
Alig confidence																																						.	.	.														.	.													.	.	.	.	.	.
Template Conservation																																																						.	.
Template Sequence		Q	R	G	L	E	N	A	L	E	G	G	I	N	E	A	C	V	F	X	S	A	S	E	T	H	N	R	K	N	I	N	K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	N	.	.	L	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R
Template Known Secondary structure												T		S								S	S						T	T	T		S																			T	T	.	.										T	T		B	T	T	T	B
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	R	D	L	R	R	H	G	V	T	M	L	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	E	A	L	F	E	F	G	I	S	E	L	S	L
Template Known Secondary structure										T		S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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