Job Description P60716 Confidence 95.97% Date Thu Jan 5 12:07:02 GMT 2012 Rank 28 Aligned Residues 148 % Identity 9% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	R	P	V	A	P	D	A	N	E	P	V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	R	D	G	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T
Query Conservation
Alig confidence																																									.																											.	.	.	.	.	.
Template Conservation																																									.																											.	.	.	.	.	.
Template Sequence		Q	N	E	K	R	F	V	P	T	A	D	K	I	A	L	I	N	R	L	S	D	C	G	Y	A	R	I	E	A	T	S	F	V	S	P	K	W	V	P	.	Q	L	A	D	S	R	E	V	X	A	G	I	R	R	A	D	G	V	R	Y	S	V	L	V	P	N	.	.	.	.	.	.	X	K	G	Y	E	A	A	A
Template Known Secondary structure			T	S	S	S															T	T	T	T		S								S		T	T	T		G	.	G	G	T	T								S				S	S	S							S	S	.	.	.	.	.	.
Template Predicted Secondary structure																																									.																											.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240						.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																															.	.	.	.																											.		.	.	.	.	.
Query SS confidence																															.	.	.	.																											.		.	.	.	.	.
Query Sequence		A	T	P	P	D	V	F	N	H	N	L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	.	.	.	.	S	L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	G	.	E	.	.	.	.	.	T	N	E	E	I	I	E	V	M	R	D	L	R	R
Query Conservation																															.	.	.	.																											.		.	.	.	.	.
Alig confidence																								.							.	.	.	.													.	.													.		.	.	.	.	.
Template Conservation																								.																							.	.
Template Sequence		A	A	H	A	D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A	N	I	.	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	.	.	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G	P	V	T	P	Q	A	V	A	S	V	T	E	Q	L	F	S
Template Known Secondary structure			T	T		S								S									T	.	S	S																			T	T	.	.										S	S			T	T	T
Template Predicted Secondary structure																								.																							.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		255	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	V	T	M	L	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	C	H	E	V	S	L
Template Known Secondary structure			T		S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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