Job Description P60716 Confidence 76.37% Date Thu Jan 5 12:07:02 GMT 2012 Rank 119 Aligned Residues 152 % Identity 20% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	R	D	G	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	P	D	V	.	F	N	H	N	L
Query Conservation																																																																												.
Alig confidence																												.	.	.	.	.	.	.	.	.																									.															.
Template Conservation																												.	.	.	.	.	.	.	.	.																									.
Template Sequence		R	A	A	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	.	.	.	.	.	.	.	.	.	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	T	G	M	N	S	I	E	S	I	.	K	K	S	V	E	I	I	R	E	A	G	V	P	Y	A	L	L	H	C	T
Template Known Secondary structure												T		S						G	G	G	T	T				.	.	.	.	.	.	.	.	.							T	T		S							T	T							.											T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.										140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	.	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	M	L	T	L	G	Q	Y	L	Q	P	S	R	H	H	L	P
Query Conservation																																													.
Alig confidence													.	.	.	.	.	.	.	.																	.	.	.	.	.	.			.												.	.
Template Conservation													.	.	.	.	.	.	.	.																	.	.	.	.	.	.															.	.
Template Sequence		N	I	Y	P	T	P	Y	E	D	V	R	.	.	.	.	.	.	.	.	L	G	G	M	N	D	L	S	E	A	F	P	D	A	I	I	.	.	.	.	.	.	G	L	S	D	H	T	L	D	N	Y	A	C	L	G	.	.	A	V	A	L	G	G	S	I	L	E	R	H	F	T	D	R	M	D	R	P	G	P	D
Template Known Secondary structure				S	S								.	.	.	.	.	.	.	.	T	T										T	T	S			.	.	.	.	.	.						S	S	S	S						.	.					T								B		S		T	T			S	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																	.	.	.	.	.	.															.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	R	Y	V	S	P	D	E	F	D	E	M	K	A	E	A	L	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	C	S	M	N	P	D	T	F	K	E	L	K	Q	G	A	H	A	L
Template Known Secondary structure		G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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