Job Description P60716 Confidence 60.19% Date Thu Jan 5 12:07:02 GMT 2012 Rank 174 Aligned Residues 153 % Identity 14% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		V	K	L	A	Q	T	I	A	D	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	R	D	G	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T	L	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	P	.	.	D	V	F	N	H	N
Query Conservation																																																																										.	.
Alig confidence																												.	.	.	.	.	.	.	.	.																									.													.	.
Template Conservation																												.	.	.	.	.	.	.	.	.																									.
Template Sequence		E	G	S	A	D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	.	.	.	.	.	.	.	.	.	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T	A	G	A	E	I	S	D	V	.	H	E	A	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	X	H	C
Template Known Secondary structure										T	T			S						G	G	G	T	T				.	.	.	.	.	.	.	.	.							T	T		S							T	T							.									T	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.										.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	S	L	K	L	L	E	R	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	.	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	V	T	M	L	T	L	G	Q	Y	L	Q	P	S	R	H	H	L
Query Conservation																																														.
Alig confidence														.	.	.	.	.	.	.	.																	.	.	.	.	.	.			.													.
Template Conservation														.	.	.	.	.	.	.	.																	.	.	.	.	.	.																.
Template Sequence		V	A	K	Y	P	A	P	P	E	Y	S	N	.	.	.	.	.	.	.	.	L	S	V	I	P	X	L	A	A	A	F	P	E	A	V	I	.	.	.	.	.	.	G	F	S	D	H	S	E	H	P	T	E	A	P	C	A	.	A	V	R	L	G	A	K	L	I	E	K	H	F	T	I	D	K	N	L	P	G	A
Template Known Secondary structure			S	S	S	S			G	G	G			.	.	.	.	.	.	.	.	T	T									S	T	T	S			.	.	.	.	.	.							S	S	S	S						.				T	T		S						B		S		T	T	S	S		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																	.	.	.	.	.	.																.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.									.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	Q	R	Y	V	S	P	D	E	F	D	E	M	K	A	E	A	L	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	H	S	F	A	L	N	P	D	E	L	K	E	X	V	D	G	I	R	K	T
Template Known Secondary structure		S		T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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