Job Description P60716 Confidence 48.45% Date Thu Jan 5 12:07:02 GMT 2012 Rank 226 Aligned Residues 214 % Identity 14% Template c1uhvD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:beta-xylosidase; PDBTitle: crystal structure of beta-d-xylosidase from2 thermoanaerobacterium saccharolyticum, a family 393 glycoside hydrolase Resolution 2.10 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.														.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																										.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	A	H	G	R	P	V	A	P	D	A	N	E	P	V	K	L	A	Q	T	I	A	D	.	M	A	L	R	Y	V	V	I	T	S	V	D	R	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	G	G	A	Q	H	F	A	D	C	I	T	A	I	R	E	K	S	P	Q	I	K	I	E	T
Query Conservation																										.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	V	G	T	G	R	L	G	L	A	L	Q	K	E	Y	I	E	T	L	K	Y	V	K	E	N	I	D	F	K	Y	I	R	G	H	G	L	L	C	D	D	V	G	I	Y	R	E	D	V	V	G	D	E	V	K	P	F	Y	N	F	T	Y	I	D	R	I	F	D	S	F	L	E	I	G	I	R	P	F	V	E	I
Template Known Secondary structure						S		G	G	G	G	G	S												T	T	S								S		T	T	S	T	T	T	T								T	T																						T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		168																						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Query Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	D	F	R	G	R	M	D	R	A	L	D	I	L	T	A	T	P	P	D	V	F	N	H	N	.	.	.	.	.	.	.	L	E	N	V	P	R	I	Y	R	Q	V	R	P	G	A	D	Y	N	W	S	L	K	L	L	E
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	M	P	K	K	L	A	S	G	T	Q	T	V	F	Y	W	E	G	N	V	T	P	P	K	D	Y	E	K	W	S	D	L	V	K	A	V	L	H	H	F	I	S	R	Y	G	I	E	E	V	L	K	W	P	F	E	I	W	N	E	P	N	L	K	E	F	W	K	D	A	D	E	K	E	Y	F	K	L	Y	K
Template Known Secondary structure				B		G	G	G	B	S	S					T	T	T	T				S		B	S																										T	T						S	S		T	T	S	T	T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280								.	.	.	.	.
Predicted Secondary structure			.	.	.	.																			.																			.	.																									.	.	.	.	.	.	.
Query SS confidence			.	.	.	.																			.																			.	.																									.	.	.	.	.	.	.
Query Sequence		R	.	.	.	.	F	K	E	A	H	P	E	I	P	T	K	S	G	L	M	V	G	L	.	G	E	T	N	E	E	I	I	E	V	M	R	D	L	R	R	H	G	.	.	V	T	M	L	T	L	G	Q	Y	L	Q	P	S	R	H	H	L	P	V	Q	R	Y	V	S	.	.	.	.	.	.	.	P	D	E	F	D
Query Conservation			.	.	.	.																			.																			.	.																									.	.	.	.	.	.	.
Alig confidence			.	.	.	.													.	.	.				.																			.	.																									.	.	.	.	.	.	.
Template Conservation																			.	.	.
Template Sequence		V	T	A	K	A	I	K	E	V	N	E	N	L	K	V	G	G	.	.	.	P	A	I	C	G	G	A	D	Y	W	I	E	D	F	L	N	F	C	Y	E	E	N	V	P	V	D	F	V	S	R	H	A	Y	T	S	K	Q	G	E	Y	T	P	H	L	I	Y	Q	E	I	M	P	S	E	Y	M	L	N	E	F	K
Template Known Secondary structure												T	T	S					.	.	.					S	S		T												T	T	T				S									B							S	S						B
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.													300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	K	A	E	A	L	A	M	G	F	T	H	A	.	.	.	.	.	.	.	.	.	.	.	.	A	C	G	P	F	V	R	S	S	Y	H	A	D	L	Q	A	K	G	M
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	R	E	I	I	K	N	S	H	F	P	N	L	P	F	H	I	T	E	Y	N	T	S	Y	S	P	Q	N	P	V	H	D	T	P	F	N	A	A	Y	I	A	R	I	L
Template Known Secondary structure									T	S	S	S	T	T										S		S		T	T		G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions