Job Description P39357 Confidence 2.07% Date Thu Jan 5 11:59:47 GMT 2012 Rank 34 Aligned Residues 87 % Identity 7% Template c3rkoL_ PDB info PDB header:oxidoreductase Chain: L: PDB Molecule:nadh-quinone oxidoreductase subunit l; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	I	S	P	M	F	M	C	V	P	M	L	S	G	L	L	V	A	H	G	F	L	P	P	H	P	G	P	T	V	I	A	R	E	Y	G	A	D	V	G	L	V	L	I	Y	G	I	I	V	G	I	P	T	F	I	L	C	G	P	V	L	N	K	F	C	Q	R	I	I	P	D	A	F	K	K	E	G	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	K	S	I	P	L	V	Y	L	C	F	L	V	G	G	A	A	L	S	A	L	P	L	V	T	A	G	F	F	S	K	D	E	I	L	A	G	A	M	A	N	G	H	I	N	L	M	V	A	G	L	V	G	A	F	M	T	S	L	Y	T	F	R	M	I	F	I	V	F	H	G	K	E	Q	I	H	A	H	A
Template Known Secondary structure			T	T	T																	T		S	S	S	B															T	T	T																												S	S				S
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		212	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	G	A	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	G	V	T	H	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		448	.	450	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions