Job Description P06136 Confidence 2.19% Date Thu Jan 5 10:59:05 GMT 2012 Rank 80 Aligned Residues 85 % Identity 22% Template c3aqpB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus Resolution 3.30 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		T	R	L	A	G	I	L	F	L	L	T	V	L	T	T	V	L	V	S	G	W	V	V	L	G	W	M	E	D	A	Q	R	L	P	L	.	.	.	.	.	S	K	L	V	L	T	G	E	R	H	Y	T	R	N	D	D	I	R	Q	S	I	L	A	L	G	E	P	G	T	F	M	T	Q	D	V	N	I	I	Q	T
Query Conservation																																					.	.	.	.	.
Alig confidence																																					.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	N	L	T	S	L	F	L	L	G	V	F	L	L	A	L	L	F	V	W	K	P	W	A	P	E	E	P	K	V	R	L	G	L	D	L	K	G	G	L	R	I	V	L	E	A	D	V	E	N	P	T	L	D	D	L	E	K	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	L	E	N
Template Known Secondary structure																								S	S		S					S				S	T	T	T											S	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.															.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	E	Q	R	L	P	W	I	K	Q	V	S	V	R	K	Q	W	P	D	E	L	K	I	H	L
Query Conservation
Alig confidence				.			.
Template Conservation				.			.
Template Sequence		R	I	.	N	A	.	L	G	V	A	E	P	L	I	Q	I	Q	G	Q	K	R	I	V	V	E	L
Template Known Secondary structure				.			.				S	S							T	T	T
Template Predicted Secondary structure				.			.
Template SS confidence
		69	70		.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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