Job Description P06136 Confidence 3.96% Date Thu Jan 5 10:59:05 GMT 2012 Rank 27 Aligned Residues 82 % Identity 7% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		L	F	L	L	T	V	L	T	T	V	L	V	S	G	W	V	V	L	G	W	M	.	.	E	D	A	Q	R	L	P	L	S	K	L	V	L	T	G	E	R	H	Y	T	R	N	D	D	I	R	Q	S	I	L	A	L	G	E	P	G	T	F	M	T	Q	D	V	N	I	I	Q	T	Q	I	E	Q	R	L	P	W	I
Query Conservation																							.	.
Alig confidence																							.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		I	F	A	W	V	I	A	I	I	I	M	L	A	G	G	L	A	I	L	K	L	P	V	A	Q	Y	P	T	I	A	P	P	A	V	T	I	S	A	S	Y	P	G	A	D	A	K	T	V	Q	D	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	V	I	E	Q	N	M	.	N	G	I	D	N	L
Template Known Secondary structure																				T	T	S				S	S				S											T	T										T	.	.	.	.	.	.	.	.	.	.	.	.	.							T		.				S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.														.	.	.	.	.	.	.	.		70	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	V	S	V	R	K	Q	W	P	D	E	L	K	I	H	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Y	M	S	S	N	S	D	S	T	G	T	V	Q	I	T	L	T
Template Known Secondary structure										T	T	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions