Return to main results Retrieve Phyre Job Id

Job DescriptionP06136
Confidence4.68%DateThu Jan 5 10:59:05 GMT 2012
Rank22Aligned Residues88
% Identity15%Templatec1gytG_
PDB info PDB header:hydrolaseChain: G: PDB Molecule:cytosol aminopeptidase; PDBTitle: e. coli aminopeptidase a (pepa)
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170.........180...... ...190.....
Predicted Secondary structure 

























.........

Query SS confidence 





























































. . . . . . . . .








Query Sequence  EYVPIARWNDQHMVDAEGNTFSVPPERTSKQVLPMLYGPEGSANEVLQGYREMGQMLAKDRF. . . . . . . . . TLKEAAMTA
Query Conservation 

 


      


  
 

           

 
 
        
     
   
     ......... 
  
    
Alig confidence 





















......

































.........








Template Conservation      
 











 


......
   
  

 

 






   
 
 
    

       

   
 
  
Template Sequence  DARPIVLVGKGLTFDSGGISIK. . . . . . PSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRP
Template Known Secondary structure  T




TTS

......
STTGGGGGGGGT
SS

STT


T
Template Predicted Secondary structure 












......

















Template SS confidence 















































































   261........270.........280.. .......290.........300.........310.........320.........330....
 
   196...200.........210.........220
Predicted Secondary structure 








Query SS confidence 
























Query Sequence  RRSWQLTLNNDIKLNLGRGDTMKRL
Query Conservation       
    
  
 

      

Alig confidence 

..




















Template Conservation 

..

 
  





 







Template Sequence  GD. . VLTTMSGQTVEVLNTDAEGRL
Template Known Secondary structure  T
..
TTS

S
TT

Template Predicted Secondary structure 

..









Template SS confidence 
























   335. ...340.........350.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions