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Job DescriptionP34211
Confidence99.44%DateThu Jan 5 11:53:05 GMT 2012
Rank64Aligned Residues255
% Identity15%Templatec3llcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative hydrolase; PDBTitle: crystal structure of putative hydrolase (yp_002548124.1) from2 agrobacterium vitis s4 at 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.........100.........110.........120.........130..
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Query Sequence  LLCGYLSVPLKYTDTGKDVSDENIPLVRLAMTKLPAKSKRKGSVIIISGGPGLPGINPYINFDWPVTNLRESWDIIGFDP
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Template Sequence  IETHAITVG. . . QGSDA. . . . . . . . . RSIAALVRAPAQDERPTCIWLGGYRSDXTGTKALEXDDLAAS. . LGVGAIRFDY
Template Known Secondary structure  S...SGGG
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SSTTS


TT

TTS..T


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   8.10...... ...20. ........30.........40.........50.........60... ......70...
 
   133......140.........150.........160.........170.........180.........190.........200.........210..
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Query Sequence  RGVGQSFPAINCQQSNQERLVNVSEKQLILQKINACIHNTGAEVIRHIGSHEAVYDIERIRQALGDKQLTAVAYSYGTQI
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Template Sequence  SGHGASG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GAFRDGTISRWLEEALAVLDHFKPEKAILVGSSXGGWI
Template Known Secondary structure  TTSTT

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GGG



ST
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   74.....80 .........90.........100.........110........
 
   213......220.........230.........240.........250.........260.........270.........280.........290..
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Query Sequence  AALYAERFPSSIRSIVFDGVVDIDDLNDNFSWKLRQAHSYQETFDRFAAWCARTKSCPLSSDRNQAIHQFHQLLLKLHNS
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Template Sequence  ALRLIQELKARHDNPTQVSGXVLIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALXEDGRAN. . .
Template Known Secondary structure  T
S

S
S

TTTTGGG

S

TT
SS
T...
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   119120.........130.........140.........150.........160.........170.........180.........190.....
 
   293......300.........310.........320.........330.........340.........350.........360.........370..
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Query Sequence  PLTDSRGESISSDDLISLTTELLLWRSSWPTLATAVRQFSQGIVSNEIETALNSSIASEKVSDALGVILCVDQSDEQLSQ
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   373......380.........390.........400.........410.........420.........430.........440.........450
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Query Sequence  EQRKSRKKALADAFPAVNFEREQSDLPEFCELWPIHRDLQQTRLKNTVLPSGLLFVAHKYDPTTPWINARKMADKFSA. .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RVXAGXIDTGCPVHILQGXADPDVPYQHALKLVEHLPADD
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TTS




S
TT
SSS
TS
SSS
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   196...200.........210.........220.........230.....
 
   451........460.........470.........
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Query Sequence  . PLLTINGDGHTLALAGTNLCVDEAVVRHL
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Template Sequence  VVLTLVRDGDHRLSRPQDIDRXRNAIRAXI
Template Known Secondary structure  TT

SS

S
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   236...240.........250.........260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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